Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0607 ATGGATGAGCTTGCATTTTTAATGGATTGGGATTTGGAAGCTATCAATGGATTAGCTCCAACAACAAATTATTTTTCTCATTTATTTTCTGAACAAGATGATGAGTTATTATTTGGAAGTTTACCAGAATTCTCAAAAACCAAAAATGCTCTTATTGATGAATTTGAAGAACTTTGCAAACCTTGCTACCCTCTTTCATCTCAAACCATCGTTACAAATTCTCTTACTACTGTCCCAAAAGAGCCTCATCATGAAGTCAAAGAAATTAAAGCATCAAAGAAAGTAGCTTCTCAAGATTTGCAAGTTCTTGCAGTACCTAAATGTAAAAAAAGCAAGAAAAACAAGAACAAGAGTATTGTGAAGAAAGTAACAGCAATGGATGGTACTCTTTGTGATGCATGGGCATGGCGAAAATATGGACAAAAACCGATAAAGGGTTCACCTTATCCGCGAAGCTACTATAAATGCAGCAGTTCCAAAGGATGTCCGGCAAGAAAACAAGTTGAAAAGAATCATTTGGATCCAAAAGTTTATATAGTTACGTACACTGCAGAACATAATCATCCTGAACCAACTCGAAGAAACTCGTTAGCCGGAAGCACGAGGAAGAACAATCTCTTGGTTACACATTCTTCAAGCACATTAACTCGTGCCCAAAAAACTTGTTCTATAAATTCTTTAGTGGTAACTCACTCTCCAAACACACCTTTGGTGAAAATTGAAGATGAGGTAAGTATGCAAGAACAAAGTAATGGAATATTGGAGGATGCGGAAGATCATCATCTTCTTGAGTGGTTGAATGGTGGTCAATTATGTGATGATGATGGTTGGATTCCAAATAAAGAGCTAGAGGAATTTATTGGACTAGATAATATGTACCAATAA 885 0.3605 MDELAFLMDWDLEAINGLAPTTNYFSHLFSEQDDELLFGSLPEFSKTKNALIDEFEELCKPCYPLSSQTIVTNSLTTVPKEPHHEVKEIKASKKVASQDLQVLAVPKCKKSKKNKNKSIVKKVTAMDGTLCDAWAWRKYGQKPIKGSPYPRSYYKCSSSKGCPARKQVEKNHLDPKVYIVTYTAEHNHPEPTRRNSLAGSTRKNNLLVTHSSSTLTRAQKTCSINSLVVTHSPNTPLVKIEDEVSMQEQSNGILEDAEDHHLLEWLNGGQLCDDDGWIPNKELEEFIGLDNMYQ* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0607 294 Pfam WRKY DNA -binding domain 132 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0607 294 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 9 251 IPR044810 GO:0003700
Tpr3g0607 294 Gene3D WRKY domain 113 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g0607 294 SUPERFAMILY WRKY DNA-binding domain 129 191 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g0607 294 SMART WRKY_cls 130 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0607 294 ProSiteProfiles WRKY domain profile. 125 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0607 294 PANTHER WRKY TRANSCRIPTION FACTOR 63-RELATED 9 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0607 Tpr-Chr3 5958344 5960088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0607 1 273 WRKY Transcription Factor Family AT4G23550 39.384 3.47e-48 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g0607 WRKY 8.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0607 K13426 K13425 gmx:102663255 252.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0607 3 5958344 5960088 Tpr3g0607 3 5958344 5960088 ECH
Tpr3g0607 3 5958344 5960088 Tpr1g0807 1 6746526 6748204 ECH
Tpr3g0607 3 5958344 5960088 Tpr5g1357 5 26425817 26427879 ECH
Tpr3g0607 3 5958344 5960088 Tpr6g3636 6 39636773 39638680 ECH