Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0598 ATGGAACAGAAAAGCTTGCTGATATCAGCACTTAGTGTTGGTGTTGGAGTTGGAATTGGATTAGCTTCTGGACAAACTGTTTCTAAATGGGGAGGACCTGCTTATTATTCTTCTTCATCTTCTTCAAACTCTGTTATTACTGCTGATCAAATTCAACATGAAATGCTCCGGTTAATTGTTGATGGCAGAGATAGCAACGTTACTTTCGACAAATTCCCTTATTACCTAAGTGAGCAAACACGGGTTTTGTTGACAAGTGCTGCTTATGTTCATTTAAAGCATGCTGAAGTTTCTAAATATACGCGTAATCTTGCTCCTGCTAGTAGAACTATTCTTCTCTCTGGCCCTGCTGAACTTTACCAACAAGTGCTTGCCAAGGCTTTAGCTCATTACTTTGAGGCCAAGTTGCTTCTCTTGGATTTAACCGACTTTTCATTGAAGGTTCAAAGTAAATATTGTTCTGGCAACAAAGAATATTCTTTCAAAAGATCCACTTCAGAATCAACTTTGGAGAAGCTATCTGATCTATTTGGATCATTTTCAATCTTTCAACAAAGAGAGGAACCTAAAGTTGCAGGAAAAATGCGCAGGCAAAGCAGTGGAATGGACCTACAATCAATGGGTAATGAAGCATCTTGTAATCCTCCAAAGCTCCGTAGGAACGCTTCTTCGTCTTCAAATATCAGTGGCCTTACTTCGCAAAGCAATCCTACAAATTCAGCTCCTTTGAAGCGCACGGCCAGCTGGTCTTTCGATGAAAAACTACTTATACAGTCTCTTTACAAGGTTCTAGTGTCTGTATCTAAAACCTATCCAACTGTGCTATATCTGAGGGATGTTGATAGGTTATTATGTAGATCACAGAAGATATATAACATGTTCCAAAACATGTTGAAGAAACTCTCTGGACCAATTCTGATTCTTGGTTCGCGAGTTCTAGATTCTAGTAATGAATTTGAAGAGCCGGATGAGAAACTTACTTTGCTCTTCCCGTACGATATAGAAATCAGACCTCCAGAAGATGAAACACATCTTGTCAGCTGGAAGTCTCAATTGGAAGAGGATATGAAGATGATACAAGTTCAGGATAACAAGAATCATATCACGGAAGTGCTTGCAGCCAATGATCTCGATTGCGATGACTTGGATTCCATCTGTGTGGAAGACACGATGGTTCTCAGTAACTATATAGAAGAGATTATTGTGTCAGCGATCTCTCATCATTTGATGAAAAACAAAGACCTTGAATATAGAAATGGAAAGCTAATTATTTCTTGCAATAGTTTGTCGCATGCATTGGGTATATTCCGAAAGGGGAAATTCAGTGGAAGTGATACATCAAAATTGGAAGATCAAGCTCCAAAATCTGAGATTCCAAGCGTAGTAGAAACTGTTGCTAAACCAGCAGCGAAGGCTGAAAGTGCTGCTGCTCCGGAAAAAAAGGCTGAAGCAGAAATATCAACTCTAGGGGCAAAGACAGGTGTTGAAAAATCAGTTCCACCATCTAAAGCTCCCGACGTTGCTCCTGATAACGAATTTGAGAAGCGAATAAGGCCTGAAGTTATACCAGCAAATGAGATCGATGTCACATTCGCTGATATTGGTGCCTTAGAAGAGACAAAGGAATCCCTTCAAGAACTAGTAATGCTTCCTCTCCGAAGGCCGGACCTTTTCACCGGAGGACTTCTAAAGCCATGCAGAGGAATATTGCTATTTGGACCTCCTGGAACTGGGAAGACAATGCTAGCAAAGGCCATTGCAAAAGAAGCTGGAGCAAGTTTCATTAATGTGTCTATGTCTACAATCACATCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGCGCTTTATTCACACTTGCAGCCAAAGTCTCTCCAACTATTATATTTGTCGATGAGGTTGATAGCATGCTCGGGCAACGAACAAGAGTTGGGGAGCATGAAGCCATGCGGAAAATAAAGAATGAATTTATGTCTCATTGGGATGGGCTCACGACAAAACAAGGAGAGCGCATCCTTGTTCTTGCAGCAACCAATAGGCCATTTGACCTGGATGAAGCTATTATAAGGCGATTCGAAAGGAGAATTATGGTAGGACTACCATCTGTTGAGAACAGGGAAAAGATTTTAAGGAGACTTTTGGGAAAAGAAAAGGTGGACAAGGAAATTGATTTTAAGGAACTTGCCACCATGACAGAAGGATATACCGGAAGTGATCTAAAGAACTTTTGCACAACTGCTGCTTATCGACCTGTTCGAGAGTTGATTCAGCAAGAGAGATTAAAGGATCTGGATAAGAAAAAGAAAGCTACGAAGGAAAAAAGCAAAAATACCGAAGACGAAGCGAAGGAGGAAGTTCAAAAAGAAAGAGTTATTACCCTAAGGCCATTGAATATGCAGGATTTCAAAGAGGCCAAGAAACAAGTTGCTGCAAGCTTTTCTGCTGAGGGTGCTGGGATGGGTGAATTGACTCAGTGGAATGAGTTGTATGGAGAAGGTGGTACTAGGAAGCAAAAGCAATTGTCATATTTCCTGTGA 2538 0.407 MEQKSLLISALSVGVGVGIGLASGQTVSKWGGPAYYSSSSSSNSVITADQIQHEMLRLIVDGRDSNVTFDKFPYYLSEQTRVLLTSAAYVHLKHAEVSKYTRNLAPASRTILLSGPAELYQQVLAKALAHYFEAKLLLLDLTDFSLKVQSKYCSGNKEYSFKRSTSESTLEKLSDLFGSFSIFQQREEPKVAGKMRRQSSGMDLQSMGNEASCNPPKLRRNASSSSNISGLTSQSNPTNSAPLKRTASWSFDEKLLIQSLYKVLVSVSKTYPTVLYLRDVDRLLCRSQKIYNMFQNMLKKLSGPILILGSRVLDSSNEFEEPDEKLTLLFPYDIEIRPPEDETHLVSWKSQLEEDMKMIQVQDNKNHITEVLAANDLDCDDLDSICVEDTMVLSNYIEEIIVSAISHHLMKNKDLEYRNGKLIISCNSLSHALGIFRKGKFSGSDTSKLEDQAPKSEIPSVVETVAKPAAKAESAAAPEKKAEAEISTLGAKTGVEKSVPPSKAPDVAPDNEFEKRIRPEVIPANEIDVTFADIGALEETKESLQELVMLPLRRPDLFTGGLLKPCRGILLFGPPGTGKTMLAKAIAKEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDSMLGQRTRVGEHEAMRKIKNEFMSHWDGLTTKQGERILVLAATNRPFDLDEAIIRRFERRIMVGLPSVENREKILRRLLGKEKVDKEIDFKELATMTEGYTGSDLKNFCTTAAYRPVRELIQQERLKDLDKKKKATKEKSKNTEDEAKEEVQKERVITLRPLNMQDFKEAKKQVAASFSAEGAGMGELTQWNELYGEGGTRKQKQLSYFL* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0598 845 ProSitePatterns AAA-protein family signature. 672 691 IPR003960 GO:0005524|GO:0016887
Tpr3g0598 845 CDD AAA 567 700 - -
Tpr3g0598 845 Gene3D - 701 807 - -
Tpr3g0598 845 Gene3D - 528 816 IPR027417 -
Tpr3g0598 845 SMART AAA_5 565 702 IPR003593 -
Tpr3g0598 845 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 528 816 IPR027417 -
Tpr3g0598 845 Pfam ATPase family associated with various cellular activities (AAA) 569 699 IPR003959 GO:0005524|GO:0016887
Tpr3g0598 845 MobiDBLite consensus disorder prediction 766 787 - -
Tpr3g0598 845 MobiDBLite consensus disorder prediction 188 239 - -
Tpr3g0598 845 Pfam AAA+ lid domain 723 765 IPR041569 -
Tpr3g0598 845 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 845 - -
Tpr3g0598 845 MobiDBLite consensus disorder prediction 199 239 - -
Tpr3g0598 845 Coils Coil 761 788 - -
Tpr3g0598 845 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0598 Tpr-Chr3 5873305 5879183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0598 529 761 Calmodulin-binding Proteins AT3G56690 38.983 1.11e-42 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0598 - - mtr:MTR_8g099065 1434.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0598 3 5873305 5879183 Tpr3g0598 3 5873305 5879183 ECH