Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0595 ATGGGTAGCAACTGCAGCACCGGCATCAACACCACCACCACCTACTCCGATCATCCACCTCAAAACCTCCCCAAAATCCTCCCTCAAAACTCCACTCCCTCACCCCCTCAACCTCCCTTATCCACCACCATCGGCCGAATCCTCGGCCGTCCCATGGAAGACGTCCGCTCAATCTTCATCTTCGGCCGCGAACTCGGCCGTGGCCAATTCGGCGTTACTTATTTAGTAACCCACAAAGTCACGAAAGAACAATTCGCTTGCAAATCAATCGCTACACGAAAACTCATAAACCGTGATGATATTGATGATGTTCGTCGTGAAGTTCAGATCATGCACCACCTTACCGGTCACCGTAACATTGTTGAACTCAAAGGTGCTTATGAGGATAAACACTCTGTTAACCTTGTAATGGAGCTTTGTGCCGGCGGTGAACTTTTTGATCGGATTATTACTAAAGGACATTACTCTGAACGTGCTGCTGCTAACCTTTGCCGTCAGATTGTTACCGTGGTTCATAACTGTCATACTATGGGAGTTATGCATAGAGACTTGAAGCCTGAGAATTTCTTGTTTCTTGGTAAAGATGAGAATTCGCCTCTTAAGGCTACGGATTTTGGTCTCTCTGTGTTTTTCAAACCAGGAGATGTATTTAAAGATCTTGTTGGGAGTGCCTATTATGTTGCTCCTGAAGTACTGCGTAGAAGTTATGGGCCCGAAACTGATATTTGGAGTGCCGGGATTATATTATACATTCTGCTTTCTGGTGTACCCCCCTTCTGGGCAGAAAATGAAAAGGGTATCTTTGATGCTATTCTTCGTGGACATATTGATTTTGCGTCGGAACCTTGGCCTTCTATATCAAGTAGTGCCAAAGACCTGGTCAAGAAGATGCTACGAGATGACCCCAAAGAACGGCTTTCAGCAGTTGAAGTACTTAATCACCCTTGGATGAGAGTAGATGGAGATGTATCTGACAAGCCTCTTGATATTGCTGTTTTAAGCAGAATGAAACAATTCCGAGCAATGAACAAGCTAAAGAAAGTAGCTTTGAAGGTTATCGCCGAAAATCTTTCTGAAGAAGAAATTATTGGCTTGAAAGAAATGTTCAAATCCATGGATACAGACAACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCCGGTCTCCCTAAACTTGGCAGTAAAATGACCGAGTCGGAAGTAAGGCAGCTGATGGAAGCGGCCGATGTGGACGGCAATGGAACCATTGACTATATTGAATTTATAACCGCCACCATGCATATGAATAGAATGGAAAGAGAAGATCACCTATACAAAGCCTTTGAATATTTTGACCAAGATAAGAGCGGGTACATCACAAAGGAAGAGTTGGAATCTGCCCTTAAGAAGTATAATATGGGTGATGAGAATACAATAAAGGAGATCATCGCCGAAGTTGATACAGACAATGATGCAAGAATCAACTATGACGAGTTTGTAGCTATGATGAGAAAAGGCAACCCAGATATAATAACTCACAGACGTCGCAAATAA 1533 0.4331 MGSNCSTGINTTTTYSDHPPQNLPKILPQNSTPSPPQPPLSTTIGRILGRPMEDVRSIFIFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLINRDDIDDVRREVQIMHHLTGHRNIVELKGAYEDKHSVNLVMELCAGGELFDRIITKGHYSERAAANLCRQIVTVVHNCHTMGVMHRDLKPENFLFLGKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPETDIWSAGIILYILLSGVPPFWAENEKGIFDAILRGHIDFASEPWPSISSSAKDLVKKMLRDDPKERLSAVEVLNHPWMRVDGDVSDKPLDIAVLSRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGSKMTESEVRQLMEAADVDGNGTIDYIEFITATMHMNRMEREDHLYKAFEYFDQDKSGYITKEELESALKKYNMGDENTIKEIIAEVDTDNDARINYDEFVAMMRKGNPDIITHRRRK* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0595 510 PANTHER SERINE/THREONINE-PROTEIN KINASE 22 502 - -
Tpr3g0595 510 SUPERFAMILY EF-hand 356 497 IPR011992 -
Tpr3g0595 510 ProSitePatterns Protein kinases ATP-binding region signature. 65 88 IPR017441 GO:0005524
Tpr3g0595 510 ProSiteProfiles EF-hand calcium-binding domain profile. 468 502 IPR002048 GO:0005509
Tpr3g0595 510 MobiDBLite consensus disorder prediction 1 22 - -
Tpr3g0595 510 SMART efh_1 436 464 IPR002048 GO:0005509
Tpr3g0595 510 SMART efh_1 400 428 IPR002048 GO:0005509
Tpr3g0595 510 SMART efh_1 471 499 IPR002048 GO:0005509
Tpr3g0595 510 SMART efh_1 364 392 IPR002048 GO:0005509
Tpr3g0595 510 ProSitePatterns EF-hand calcium-binding domain. 445 457 IPR018247 -
Tpr3g0595 510 SMART serkin_6 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0595 510 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 15 22 502 - -
Tpr3g0595 510 Gene3D Phosphorylase Kinase; domain 1 61 144 - -
Tpr3g0595 510 SUPERFAMILY Protein kinase-like (PK-like) 59 318 IPR011009 -
Tpr3g0595 510 CDD STKc_CAMK 59 316 - -
Tpr3g0595 510 ProSiteProfiles EF-hand calcium-binding domain profile. 360 395 IPR002048 GO:0005509
Tpr3g0595 510 ProSiteProfiles EF-hand calcium-binding domain profile. 396 431 IPR002048 GO:0005509
Tpr3g0595 510 Pfam Protein kinase domain 62 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0595 510 ProSitePatterns EF-hand calcium-binding domain. 373 385 IPR018247 -
Tpr3g0595 510 Gene3D Transferase(Phosphotransferase) domain 1 145 326 - -
Tpr3g0595 510 ProSiteProfiles Protein kinase domain profile. 59 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0595 510 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Tpr3g0595 510 CDD EFh 365 424 IPR002048 GO:0005509
Tpr3g0595 510 Gene3D - 327 500 - -
Tpr3g0595 510 ProSitePatterns EF-hand calcium-binding domain. 409 421 IPR018247 -
Tpr3g0595 510 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672|GO:0006468
Tpr3g0595 510 Pfam EF-hand domain pair 435 497 IPR002048 GO:0005509
Tpr3g0595 510 Pfam EF-hand domain pair 365 425 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0595 Tpr-Chr3 5848104 5852299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0595 45 509 EF-hand Containing Proteins AT4G23650 79.785 0.0 806
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr3g0595 Pkinase 1.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0595 K13412 - gmx:100777096 906.746
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0595 3 5848104 5852299 Tpr3g0595 3 5848104 5852299 ECH
Tpr2g3896 2 41703768 41709154 Tpr3g0595 3 5848104 5852299 PCT