Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0588 ATGAACGACACTGATGTCTCCAACCAAATCCACCAGATGGTGAGGTTTATCCAGCAAGAAGCTGAAGAAAAAGCCACCGAGATTTCTCTCTCCGCCGAAGAGGAGTTCAATATCGAGAAGCTTCAATTGGTCGAAGCCGAGAAGAAGAAGATCAAGCAAGAATATGAACGGAAAGAGCGCCAAATTGAAATTCGAAAGAAGATTGAGTACTCAATGCAGCTGAATGCATCTCGGATCAAAGTTCTTCAAGCTCAAGATGACATTGTTAATTCAATGAAAGAAGTTGCAGCCAAGGAACTTTTGAAGGTGAGCCATCATCACCTTGTTGAGGATATTTTGCATCTGGGCCATCATGAGTACAGAAACCTTCTAAAGGGTCTCATTGTTCAGAGTTTGCTAAGACTGAGAGAACCTTCTGTCTTGTTGAGATGTCGGAAACATGACTTGCACATGGTAGAGCATGTGCTTGATGAAGCCGCACAAGAGTATGCTGAAAAAGCAGGTGTTCATCCACCAGAGATCATTGTTGACCACGATGTCTATCTTCCACCTGCACCCAAGCATCACAAAACTCACGATCCCTACTGCTCTGGTGGGGTGGTGTTGGCTTCTCGCGACGGAAAGATTGTGTGTGAAAATACTCTTGATGCACGACTGGATGTTGTGTTCCGTCAAAAGCTTCCAGAGATCCGAAAACAGCTCTTTGGACAAGTTGCTGCTTGA 723 0.4467 MNDTDVSNQIHQMVRFIQQEAEEKATEISLSAEEEFNIEKLQLVEAEKKKIKQEYERKERQIEIRKKIEYSMQLNASRIKVLQAQDDIVNSMKEVAAKELLKVSHHHLVEDILHLGHHEYRNLLKGLIVQSLLRLREPSVLLRCRKHDLHMVEHVLDEAAQEYAEKAGVHPPEIIVDHDVYLPPAPKHHKTHDPYCSGGVVLASRDGKIVCENTLDARLDVVFRQKLPEIRKQLFGQVAA* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0588 240 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 240 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tpr3g0588 240 Gene3D - 1 62 - -
Tpr3g0588 240 SUPERFAMILY V-type ATPase subunit E-like 108 236 - -
Tpr3g0588 240 Coils Coil 38 68 - -
Tpr3g0588 240 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 240 - -
Tpr3g0588 240 Hamap V-type proton ATPase subunit E [atpE]. 8 236 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tpr3g0588 240 Pfam ATP synthase (E/31 kDa) subunit 16 235 IPR002842 GO:0033178|GO:0046961|GO:1902600
Tpr3g0588 240 Gene3D - 94 239 IPR038495 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0588 Tpr-Chr3 5778705 5782509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0588 1 240 Primary Pumps ATPases(2) AT4G11150 71.250 4.65e-120 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0588 K02150 - gmx:100500452 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0588 3 5778705 5782509 Tpr3g0588 3 5778705 5782509 ECH