Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0573 ATGGAGAATGAATGTAACTGGGAGCACAACACACTCATTAATGAGCTAATTCAAGGAATGGATGTAGCAAAGAGATTGAAGGAAGAGTTGAGGACACCGTATTCTCTTGACACAAGGGATTTGCAGGTGCAGATGATATTATCTTCTTACGAAAAGGCTCTACGAATTCTAAGATGTAATGAATCGACTTCTAAGTCGCAGACTATAACTCCATTAACAACTTCGTTACCGGAGTCCCCTGCGTCTACCAATGGTAGTCCGCTGAGCGAGGACTTTGACGGGGCCATCCAAGAACACCGGGAGGTTAAAAACAAATCAAAGAAAAGAAAGGTTATGCCCAAATTGATGGATCAGATAAAAGTTAGCTGTGAAAGTGGCCTTGAAGGACCACATGAAGATGGCTATAACTGGAGAAAATATGGTCAGAAAGATATCCTCAGTGCCAAACATCCAAGAAGTTACTATAGGTGCACCTTCCGCAACACACAGAACTGCTGGGCCACAAAGCAAGTGCAGAGATCAGATGAAGATCCGACAATATTCGACATAACTTATAGAGGAAAGCATACCTGTTCTCAGGGAAAGAATGCAATTGAACCATATAAGTCACAAGAAAAACAAGAGAAACTACACAGTCATAATAATAATGATATTCAACATGCACACCCATCACAAGAAAGCTTTACAAACTTCAGCAACATCTTGACTGTCAAAACGGATAATCTGGGAAACGAACAGAGTCCCTTCCCTTCCACTTCATTTGGATACACAACACAAGAAAACCATAGCTGGGTTCCTTCAGGCTTAGAAAACGATTCCTTCTTGAGCGGCCTTTTCCAAACACACTTATTATCTCCAGTAACACCAGAATCAAACTATTTCTCATCTCCAACTTTCCAGATGAGTGAGTTTGATGGGTTCTATAACAATCCTCGTTCAGAATCCGACATTACAGAGATCATTTCCACCAACACATCAGTCACAAATTCTCCGATTCCCAATTTTCATTTTCCACTCGATTCAGTGGAAATCGATCCAAATTTCCCTTTCAATACTCCAGGCTTTTTCTCCTAA 1074 0.4088 MENECNWEHNTLINELIQGMDVAKRLKEELRTPYSLDTRDLQVQMILSSYEKALRILRCNESTSKSQTITPLTTSLPESPASTNGSPLSEDFDGAIQEHREVKNKSKKRKVMPKLMDQIKVSCESGLEGPHEDGYNWRKYGQKDILSAKHPRSYYRCTFRNTQNCWATKQVQRSDEDPTIFDITYRGKHTCSQGKNAIEPYKSQEKQEKLHSHNNNDIQHAHPSQESFTNFSNILTVKTDNLGNEQSPFPSTSFGYTTQENHSWVPSGLENDSFLSGLFQTHLLSPVTPESNYFSSPTFQMSEFDGFYNNPRSESDITEIISTNTSVTNSPIPNFHFPLDSVEIDPNFPFNTPGFFS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0573 357 PANTHER WRKY TRANSCRIPTION FACTOR 41-RELATED 1 353 - -
Tpr3g0573 357 SMART WRKY_cls 131 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0573 357 MobiDBLite consensus disorder prediction 67 87 - -
Tpr3g0573 357 ProSiteProfiles WRKY domain profile. 126 189 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0573 357 SUPERFAMILY WRKY DNA-binding domain 130 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g0573 357 Pfam WRKY DNA -binding domain 132 191 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr3g0573 357 Gene3D WRKY domain 117 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr3g0573 357 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 1 353 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0573 Tpr-Chr3 5667456 5669278 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0573 6 349 WRKY Transcription Factor Family AT4G11070 39.205 4.74e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr3g0573 WRKY 4.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0573 - - gmx:100815760 515.768
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0573 3 5667456 5669278 Tpr3g0573 3 5667456 5669278 ECH
Tpr3g0573 3 5667456 5669278 Tpr5g1428 5 27298611 27301899 ECH
Tpr3g0573 3 5667456 5669278 Tpr6g0082 6 694478 696277 ECH