Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0540 ATGGAAGATGCTGAAACCAAATCAAGAATCGAGGAAACAGTTCTTAAGATCCTCCATGAATCAAACATGGAAGAGGTAACTGAATCAAAGATTCGAAAACAAGCCTCCACTGAATTGGACCTAAACCTAAATCAGCCCCCATTCAAAGCTTTGGTGAAGCAAATCATTGAAGATTTTCTTGTAGAGAAGCAGCAACAACAGCAAAAGCAAGAAGAAGAAGAAGAAAAGCAAGAGGTTAAACAAAAAGGTGTTTCCAGCAAAAGCAGTGTCTATGTTGATTCTGGCGATCTCGTCATTTGCGAGCTTTCGCAAAAGAAAAAGGTGACAATTCAGGATTTCAAAGGAAGAAGGTATGTCTCCATTCGGGAGTTTTACACCAAGGATGGCAAGGAACTTCCTTCTAGCAAAGGAATAAGTTTGTCTGGGGAGCAGTGGGAAACCTTTAAGAAATGTGTGCCTGCCATAGAAAAAGCCATTCAGAAAATGGAGTCGAGTATATAA 501 0.4012 MEDAETKSRIEETVLKILHESNMEEVTESKIRKQASTELDLNLNQPPFKALVKQIIEDFLVEKQQQQQKQEEEEEKQEVKQKGVSSKSSVYVDSGDLVICELSQKKKVTIQDFKGRRYVSIREFYTKDGKELPSSKGISLSGEQWETFKKCVPAIEKAIQKMESSI* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0540 166 MobiDBLite consensus disorder prediction 66 82 - -
Tpr3g0540 166 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 4 165 IPR045125 GO:0003713|GO:0060261
Tpr3g0540 166 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR KELP 4 165 - -
Tpr3g0540 166 PIRSF RNA_polymII_KELP 1 166 IPR017415 -
Tpr3g0540 166 Pfam Transcriptional Coactivator p15 (PC4) 100 150 IPR003173 GO:0003677|GO:0006355
Tpr3g0540 166 Coils Coil 56 82 - -
Tpr3g0540 166 MobiDBLite consensus disorder prediction 66 88 - -
Tpr3g0540 166 Gene3D Transcriptional Coactivator Pc4; Chain A 90 166 IPR009044 GO:0003677|GO:0006355
Tpr3g0540 166 SUPERFAMILY DEK C-terminal domain 4 57 - -
Tpr3g0540 166 Pfam DEK C terminal domain 5 60 IPR014876 -
Tpr3g0540 166 SUPERFAMILY ssDNA-binding transcriptional regulator domain 99 161 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0540 Tpr-Chr3 5418716 5422158 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Tpr3g0540 DEK_C 4e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0540 K25815 - gmx:100305633 186.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0540 3 5418716 5422158 Tpr3g0540 3 5418716 5422158 ECH