Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0523 ATGTTTGTTTTCACATTGATTTTGCATTCATCTTCTCATAGCATAAAAAGTAAACCGATTGAGTGGGATTTCAGAAAACGACATTCCAAGCAAAACAAAGACCTCTCCCTCCCTTGCGTCAACTGCCGACACCCCCCAGTAACAGTTTCATCAAAATCAATGGATGATGTAAAACCTTCAATCCCTCTCGTATCATTCCTCGAACGTCTTCAACAAACCGCATTCAACACATTCAATAACCATTCCAATTTCGATCCTAAAACCTACGTCGATTTACCTCTCAAATTCCCTCTCTCCGTTACCGATCACGCTTTCCAGAATCTTCCTAAATCATCCACCGGTTCAGTTTCGGTTCACGATTTGAACCGGTTTATTCAAACGTATTTTGAAGGTGCAGGTGATGATTTGGTGTACTTTGATCCAGAGGATTTTGTTCCTGTGCCGAAAGATTTTTTGCCTAAAGTGAAAAACCCTGAGGTTAGAGCTTGGGCGATTAAGGTTCATTCTCTTTGGAGAAATTTGAGTAGGAAAGTTTCCAGTGAGGTGAAGACTCATCCTGAGTTTCATACTCTGCTTCCTGTTATTGATTCTGTTGTTATTCCTGGTTCGCGGTTTCGGGAAGTTTATTATTGGGATTCTTATTGGGTAATTAGGGGCTTGTTGGCTAGTAAAATGTATAAGACTGCTAAAGGTATTGTCAACAATCTCATTTCCTTCATTGAGGAATATGGGTTTGTTCTTAATGGTGCTAGAGCATACTACACTAATAGGAGCCAGCCTCCTCTTTTAAGCGCTATGATTTATGAGATATACCATAGAACCGGTGATGTGGAATTAGTTAAAAGATCTCTACCTGCACTACTAAAAGAGCATGAGTTTTGGAACTCAGATATACATAAAGTGACTGTTTCGGATGCTCAAGGTTGCACTCACACCTTGAATCGCTATTACGCAAGGTGGAACAAACCCAGACCGGAGTCGTCCATAATGGACAAGGCATCTGCTTCCAAGTTTACATCTGTTTCTGAAAAACAACAATTTTACCGTGAACTAGCATCAGCAGCTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGACACCCTCCCAACTTCACAACATTGTCTACAACGTCAGTGATACCTGTTGATTTAAATGCATTTATACTCGGGATGGAACTTAACATTGCCTTCTTTGCAAATGTTACTGGAGATCATAGCATTGCCAAACACTTCCAGCAAATTTCTGATGTGAGAAAGGAGGCAATTAACTCTGTTTTCTGGAATGCAAACATGAAACAATGGCTTGATTCCTGGCTCAGCAATAATACACATGAGGTTCATAATTGGGATACTCTGCACCAGAATCAAAATGTATTTGCTTCCAATTTTGTTCCTTTGTGGATGAAGCCATTTTACTCAGATGCTTCCCTTGTGGGTAATGTTCTCAAAAGTCTCAAAACTTCTGGACTGCTTCGTGCTGCTGGAATTGCAACTTCTCTGAGTGATTCAGGACAGCAGTGGGATTTTCCAAATGGTTGGGCTCCACTTCAACACATGTTAGTTGAAGGTCTGGTAAAATCAGGGTTGGAAGAAGCAAGGTCATTGGCTGAGGAAATTGCCATCAGATGGATCACTACCAACTATATTGTTTACAAGAAAACAGATGTAATGCACGAAAAGTTTGACGTGGAGCATTGTGGAGAATTCGGAGGTGGGGGGGAATACGTACCTCAGACTGGTTTTGGCTGGTCGAATGGAGTTGTGTTGGCATTCTTGGAGGAGTTTGGATGGCCTGAAGATCGTAAAATAGAATGTTGA 1821 0.4119 MFVFTLILHSSSHSIKSKPIEWDFRKRHSKQNKDLSLPCVNCRHPPVTVSSKSMDDVKPSIPLVSFLERLQQTAFNTFNNHSNFDPKTYVDLPLKFPLSVTDHAFQNLPKSSTGSVSVHDLNRFIQTYFEGAGDDLVYFDPEDFVPVPKDFLPKVKNPEVRAWAIKVHSLWRNLSRKVSSEVKTHPEFHTLLPVIDSVVIPGSRFREVYYWDSYWVIRGLLASKMYKTAKGIVNNLISFIEEYGFVLNGARAYYTNRSQPPLLSAMIYEIYHRTGDVELVKRSLPALLKEHEFWNSDIHKVTVSDAQGCTHTLNRYYARWNKPRPESSIMDKASASKFTSVSEKQQFYRELASAAESGWDFSTRWMRHPPNFTTLSTTSVIPVDLNAFILGMELNIAFFANVTGDHSIAKHFQQISDVRKEAINSVFWNANMKQWLDSWLSNNTHEVHNWDTLHQNQNVFASNFVPLWMKPFYSDASLVGNVLKSLKTSGLLRAAGIATSLSDSGQQWDFPNGWAPLQHMLVEGLVKSGLEEARSLAEEIAIRWITTNYIVYKKTDVMHEKFDVEHCGEFGGGGEYVPQTGFGWSNGVVLAFLEEFGWPEDRKIEC* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0523 606 Pfam Trehalase 83 597 IPR001661 GO:0004555|GO:0005991
Tpr3g0523 606 PANTHER TREHALASE 52 606 - -
Tpr3g0523 606 ProSitePatterns Trehalase signature 2. 507 516 IPR018232 GO:0004555|GO:0005991
Tpr3g0523 606 PANTHER TREHALASE 52 606 IPR001661 GO:0004555|GO:0005991
Tpr3g0523 606 PRINTS Glycosyl hydrolase family 37 signature 243 261 IPR001661 GO:0004555|GO:0005991
Tpr3g0523 606 PRINTS Glycosyl hydrolase family 37 signature 313 330 IPR001661 GO:0004555|GO:0005991
Tpr3g0523 606 PRINTS Glycosyl hydrolase family 37 signature 348 365 IPR001661 GO:0004555|GO:0005991
Tpr3g0523 606 PRINTS Glycosyl hydrolase family 37 signature 380 397 IPR001661 GO:0004555|GO:0005991
Tpr3g0523 606 PRINTS Glycosyl hydrolase family 37 signature 423 439 IPR001661 GO:0004555|GO:0005991
Tpr3g0523 606 PRINTS Glycosyl hydrolase family 37 signature 500 516 IPR001661 GO:0004555|GO:0005991
Tpr3g0523 606 PRINTS Glycosyl hydrolase family 37 signature 580 593 IPR001661 GO:0004555|GO:0005991
Tpr3g0523 606 Gene3D - 70 604 IPR012341 GO:0005975
Tpr3g0523 606 SUPERFAMILY Six-hairpin glycosidases 81 599 IPR008928 GO:0005975
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0523 57 606 Trehalose Biosynthesis Gene Families AT4G24040 57.685 0.0 655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0523 K01194 - gmx:547539 937.947
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0523 3 5273747 5279106 Tpr3g0523 3 5273747 5279106 ECH