Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0513 ATGGGGATTTGCTTCAGCATTGAAGAAAATCAAAATCACCTTTCCCCCGCCGATTCAATCACAAAACCTAAATCAGGAAATGATTCCGGTGCTGCTGCACGAACGACTACTACATTAGGTACCGGTTCCATGAATATCAAAGAACTTCGTGAAGGTGCTGGATACAGCAACGTTACAATTTTCACATACGATGAATTGAGGCTTGCTACTAAGCAATTTCGTCCTGATTTCATTCTAGGAGAAGGTGGATTTGGAGTTGTGTATAAAGGTGTCATTGATGATAGTGTAAGAGCCGGTTATAAATCCACTGAAGTTGCTATTAAGGAACTTAATCGCGAAGGATTTCAAGGCGATAGGGAATGGCTCGCTGAAGTTAACTATCTGGGTCAATTCAGTAACCCAAATCTTGTAAAGCTCTTTGGATATTGCTGCGAGGATGAACACCGGTTGTTGGTCTATGAATACATGGCTAGTGGGAGCTTGGAGAAACATCTTTTTCGCAGAACGGGCTCAACATTGACTTGGTCGAAAAGAATGAAGATTGCTTTGCATGCTGCAAGAGGGCTTGCTTTTCTTCATGGGGCAGAAAGGCCCATCATATATCGTGACTTCAAGACATCAAATATCTTGCTAGATGCGGATTTCAATGCAAAACTTTCAGACTTTGGCCTTGCAAAGGATGGGCCGATGGGGGACCAAACACATGTTTCAACTAGAGTAATGGGCACATATGGATATGCTGCTCCGGAGTATGTCATGACTGGGCATTTAACTGCTCGAAGTGATGTGTATGGTTTTGGGGTGGTGCTACTTGAATTACTTATTGGTAGGAGAGCACTAGACAAGAGTAGGCCCAGTCGAGAGCACAACTTGGTTGAGTGGGCACGGCCGCTGTTGAATAATAATAAAAAACTTCTGAAAATTTTAGACCCAAAAGTAGAAGGGCAATATTCAAGTAAAACTGCAACAAAGGTAGCCCTTTTAGCATACCAATGTCTTAGCCAAAACCCGAAAGGCAGACCTCTCATGAGTCAGGTTGTTGAAATCCTTGAAAACTTTCAGTCAAATGAGGAAGGTCAAAACCTTCAAAGTGGTGGTAGCAGTATAACCCTTTACGAGGTTCCAAAGGGCAGCAATGATACTCCGGCTAAGGGCTAA 1158 0.4301 MGICFSIEENQNHLSPADSITKPKSGNDSGAAARTTTTLGTGSMNIKELREGAGYSNVTIFTYDELRLATKQFRPDFILGEGGFGVVYKGVIDDSVRAGYKSTEVAIKELNREGFQGDREWLAEVNYLGQFSNPNLVKLFGYCCEDEHRLLVYEYMASGSLEKHLFRRTGSTLTWSKRMKIALHAARGLAFLHGAERPIIYRDFKTSNILLDADFNAKLSDFGLAKDGPMGDQTHVSTRVMGTYGYAAPEYVMTGHLTARSDVYGFGVVLLELLIGRRALDKSRPSREHNLVEWARPLLNNNKKLLKILDPKVEGQYSSKTATKVALLAYQCLSQNPKGRPLMSQVVEILENFQSNEEGQNLQSGGSSITLYEVPKGSNDTPAKG* 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0513 385 MobiDBLite consensus disorder prediction 357 385 - -
Tpr3g0513 385 Gene3D Transferase(Phosphotransferase) domain 1 156 371 - -
Tpr3g0513 385 ProSiteProfiles Protein kinase domain profile. 73 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0513 385 MobiDBLite consensus disorder prediction 357 375 - -
Tpr3g0513 385 CDD STKc_IRAK 79 353 - -
Tpr3g0513 385 Pfam Protein tyrosine and serine/threonine kinase 79 350 IPR001245 GO:0004672|GO:0006468
Tpr3g0513 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Tpr3g0513 385 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL17-RELATED 31 381 - -
Tpr3g0513 385 Gene3D Phosphorylase Kinase; domain 1 48 155 - -
Tpr3g0513 385 ProSitePatterns Protein kinases ATP-binding region signature. 79 108 IPR017441 GO:0005524
Tpr3g0513 385 SUPERFAMILY Protein kinase-like (PK-like) 55 351 IPR011009 -
Tpr3g0513 385 PANTHER OS01G0588500 PROTEIN-RELATED 31 381 - -
Tpr3g0513 385 MobiDBLite consensus disorder prediction 15 37 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0513 Tpr-Chr3 5188765 5195206 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0513 38 350 Glycoside Hydrolase AT3G07070 49.051 1.60e-100 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr3g0513 PK_Tyr_Ser-Thr 5.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0513 - - gmx:100800465 656.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0513 3 5188765 5195206 Tpr3g0513 3 5188765 5195206 ECH