Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0507 ATGGCACTAATAAATCATATTATGAACAATAAAACCATATTCATTATATTGTTATGTGTTGTTTCATCTTATGCTGCTTCCGACTCTGAATTGCTCCTCAAGGTAAAGGAAAATCTAGAAAGACCTGACAATGTATTGACATCATGGAACGAAACAACAGCTCCTTGTGACGGCGATCATAGCAATTGGTACGGTGTTCGTTGTTATCAAGGAAAAGTTTGGGGATTGAAGCTTGAGCGTATGGGGCTAAAAGGGACCATTGATATTGATTCTCTTAGGCAGTTACCATATCTTAGAACTATTAGTTTCATGAATAATGAATTTGAAGGTTCTTGGCCTGAGATTAACAAAATTTTTGGTCTTAAGTCGATTTTTCTTTCAAATAACAATTTTTCTGGGGACATTCCTGGTGATGCTTTTGAAGGTATGATGTGGTTGAAAAAAATTCATTTGTCAAATAATCAGTTTACAGGTGCTATTCCACCTTCTGTGGTATTGTGTCCAAAGCTTATGGAGTTGAGATTGGATGGAAACTACTTCATTGGTCCTCTTCCTCATCTTAGACAAGCCAGATTGAAATCATTCACTGTAGCTAATAATCAGTTGCATGGACAAATACCAACCACACTTAGTAAAATCGCGGTTTCTTCCTTTGCCGGTAATGAAGGTTTATGTGGAAAACCATTGGCTCCATGTACCGCAAAGAAGCCGTCAATTGCAAGTATTTGTGTGGTTATTGTGGTTGTTTGTGTAGCACTGATTGTGATTGGAGCCGCAGTGTTTTTCATCCTTCATCGGCGACAAAAACGGGAGCAATCACTGGGTCAAGAGAATCCACCTTCAGGGTGCAACAACAACAAACTAGGACGGGGAGATATCGGTAATGACAGTATAAGGTCAACAGGATCAGTGAGTTCCACTCACAGCAGAAGAGGTGATCAGATGAAGTTGTCTTTTATAAAAGATGACAGAGAAAAATTTGATTTGCAAGAGTTGTTGAGAGCTAATGCTGAGATTTTGGGAAGTGGTTGTTATAGTTCTTCTTATAAGGCTTCTTTGACAACTGGACCAACAATAGTTGTGAAGAGGTTTAAGCAAATGAATAATGTAGGGAAGGAAGAGTTTCAAGAACATATGAGAAGGATAGGAAGATTGAATCATAATAATTTGATTCCTCTTGTGGCTTACTATTATAGAAAAGAAGAAAAGCTTTTGGTTACTGACTATGTTCAAAATGGCAGTCTGGCTGTTCGCCTTCATGGACACCAACAACTAGGTGAACCAAGCCTTGATTGGCCAACAAGATTGAAGATTGTGAAAGGAATAGCAAAAGGTCTTGAATATCTATACAAAGATATGCCAAGCCTAATTGCACCTCATGGAAATCTAAAATCCTCAAATGTACTTCTAACAGAAAAATTTGAACCACTCCTCATAGATTATGGATTAGTCCCAGTTACAAACCAAGAAATGGCCAAGGACATAATGGTAATATACAAATCACCTGAATATTTACAACAAGGAAGAATCACAAAGAAAAGTGATGTTTGGTGTCTTGGAATATTAATAATTGAAATTTTAACCGGTAAATTTCCAGCTACATTTTTACAACAAGGTAAAGGAAGTGAGGTGAGTTTAGCAAGTTGGGTGGATTCAGTAGTACCAGAGGAGTGGAATAGTTCAGTGTTTGATAAAGATATGGGTGAAACAAAGAATGGTGAGGGTGAGATGGAAAAACTTTTGAAAATTGCATTGAGTTGTTGTGAAGGGGATGTTGATAAAAGATGTGATTTGAAAGAAGCTGTAGAGAAAATTCAAGAAGTAAAAGAGAGAGATGAGACAGGTGACATGAAATGA 1857 0.3732 MALINHIMNNKTIFIILLCVVSSYAASDSELLLKVKENLERPDNVLTSWNETTAPCDGDHSNWYGVRCYQGKVWGLKLERMGLKGTIDIDSLRQLPYLRTISFMNNEFEGSWPEINKIFGLKSIFLSNNNFSGDIPGDAFEGMMWLKKIHLSNNQFTGAIPPSVVLCPKLMELRLDGNYFIGPLPHLRQARLKSFTVANNQLHGQIPTTLSKIAVSSFAGNEGLCGKPLAPCTAKKPSIASICVVIVVVCVALIVIGAAVFFILHRRQKREQSLGQENPPSGCNNNKLGRGDIGNDSIRSTGSVSSTHSRRGDQMKLSFIKDDREKFDLQELLRANAEILGSGCYSSSYKASLTTGPTIVVKRFKQMNNVGKEEFQEHMRRIGRLNHNNLIPLVAYYYRKEEKLLVTDYVQNGSLAVRLHGHQQLGEPSLDWPTRLKIVKGIAKGLEYLYKDMPSLIAPHGNLKSSNVLLTEKFEPLLIDYGLVPVTNQEMAKDIMVIYKSPEYLQQGRITKKSDVWCLGILIIEILTGKFPATFLQQGKGSEVSLASWVDSVVPEEWNSSVFDKDMGETKNGEGEMEKLLKIALSCCEGDVDKRCDLKEAVEKIQEVKERDETGDMK* 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0507 618 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 13 613 - -
Tpr3g0507 618 SUPERFAMILY Protein kinase-like (PK-like) 338 606 IPR011009 -
Tpr3g0507 618 PANTHER LRR RECEPTOR-LIKE KINASE 13 613 - -
Tpr3g0507 618 MobiDBLite consensus disorder prediction 273 310 - -
Tpr3g0507 618 Gene3D Ribonuclease Inhibitor 192 232 IPR032675 -
Tpr3g0507 618 Gene3D Ribonuclease Inhibitor 27 189 IPR032675 -
Tpr3g0507 618 Pfam Leucine rich repeat N-terminal domain 26 68 IPR013210 -
Tpr3g0507 618 MobiDBLite consensus disorder prediction 274 310 - -
Tpr3g0507 618 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Tpr3g0507 618 Gene3D Transferase(Phosphotransferase) domain 1 410 617 - -
Tpr3g0507 618 Pfam Protein kinase domain 337 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0507 618 SUPERFAMILY L domain-like 26 231 - -
Tpr3g0507 618 ProSiteProfiles Protein kinase domain profile. 334 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0507 618 Gene3D Phosphorylase Kinase; domain 1 299 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0507 Tpr-Chr3 5146325 5150166 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0507 13 616 Receptor kinase-like Gene Family AT5G35390 52.941 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr3g0507 Pkinase 2.7e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0507 - - gmx:100804368 892.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0507 3 5146325 5150166 Tpr3g0507 3 5146325 5150166 ECH
Tpr3g0507 3 5146325 5150166 Tpr2g0643 2 7123724 7127532 PCT