Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0499 ATGATGGCCGCATCACTATCCCTTCAACTTCCATTCCTTTCTTCTCCGACCACCAAACCACACACTCACCGGAAATTCGCCTGCGTTGCGGCGGCGGCGGCGAAAAGCGAGATTCCCCTCCTCCAAGTCAACGATCTTCGAGCAAAAATCGTAGAATCAAATGTCGAAATTCTCAGAGGCGTTAATCTCACAATTAACAGAGGAGAAATTCACGCTATCATGGGTAAAAACGGTTCTGGAAAAAGCACTTTCGCAAAAGTTCTGGTTGGTCATCCAGATTATGAAGTTACAGGTGGTAGTGTTGTTTTCAAAGGGGAAAATTTGCTTGAATTGGAACCTGAAGAAAGAGCTCTTGAAGGTCTTTTCATGAGTTTTCAATCACCTGTTGCTATCCCTGGTGTTTCAAATGATCAATTTCTTCTTATGGCTTATAATGCTCGAAGAAAAAAACTTGGTCTTCCTGAACTTGGACCCCTTGAGGGTTTTTCTTATTTAATGGAGAAACTACAACTTGTTAACATGAAGCCTGACTTTCTCAATAGGAATGTCAATGAAGGGTTTAGTGGAGGTGAACGAAAACGCAATGAAATCTTGCAACTTGCCGTTTTGGGGGCAGATTTGGCTATTTTGGATGAAATTGATTCAGGATTGGATGTTGATGCACTCAGGGATGTGGCAAGTGCAGTTAATAAAATTCTTACCCCGGAGAATTCTCTGTTGATGATTACTCACTATCGGCGAATTCTTGATCTTTTGAAACCTTCCCATGTCCATGTTATGGACAACGGCAAAATTGCAAGGACAGGCGACCTATCTATGGTAGATGCAATTGAGGCAGATGGATATGAATTAGTCTCTGCTTTAACTTAA 870 0.4184 MMAASLSLQLPFLSSPTTKPHTHRKFACVAAAAAKSEIPLLQVNDLRAKIVESNVEILRGVNLTINRGEIHAIMGKNGSGKSTFAKVLVGHPDYEVTGGSVVFKGENLLELEPEERALEGLFMSFQSPVAIPGVSNDQFLLMAYNARRKKLGLPELGPLEGFSYLMEKLQLVNMKPDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVASAVNKILTPENSLLMITHYRRILDLLKPSHVHVMDNGKIARTGDLSMVDAIEADGYELVSALT* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0499 289 TIGRFAM sufC: FeS assembly ATPase SufC 41 284 IPR010230 GO:0005524
Tpr3g0499 289 CDD ABC_FeS_Assembly 41 282 IPR010230 GO:0005524
Tpr3g0499 289 Pfam ABC transporter 58 212 IPR003439 GO:0005524
Tpr3g0499 289 Gene3D - 40 287 IPR027417 -
Tpr3g0499 289 PANTHER ABC TRANSPORTER I FAMILY MEMBER 6, CHLOROPLASTIC 18 286 IPR010230 GO:0005524
Tpr3g0499 289 SMART AAA_5 67 264 IPR003593 -
Tpr3g0499 289 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 271 IPR027417 -
Tpr3g0499 289 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 41 287 IPR003439 GO:0005524
Tpr3g0499 289 ProSitePatterns ABC transporters family signature. 187 201 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0499 Tpr-Chr3 5065126 5068699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0499 54 281 Calmodulin-binding Proteins AT2G36910 24.590 4.35e-08 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0499 K09013 - gmx:100798005 420.239