Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0495 ATGGCAGGTACGATGAAGAAAGTCGACAAGATTCGTCAAATCGTTCGTTTGAAACAACTCATGACAAGGTGGAAACAAATCAGTCTCAGTCGTCGTTCGTTTCGTGCAGAACCTGAAGAAACAACAACAACAACAACAACCTCACCATGTGTTACTCCACGAAGACAACAACCACCTTCAGGTTTTGTTTTCGTTTATGTTGGATCAGAACGACAGCGTTTTACTATCCCTGCTAGGTTTCTTAACTTTCCTGTTTTCGCTGGTCTTCTCGATGTAACTGAGGAAGAGTTTGGTTTACGAGGTAACGGTGGTTTAGTTCTTCCTTGCCACGTGGATTTTTTCACGGAAATCGTTAAACGTCTTCACAAGAATGAAAATAAGTATGGGAAATTTTCGTTGGATGCGTTTGTTAAAATGTTTTCTGACGTGGCGTTTTCTTGTAAAGAAAAAGAAAACGTCGTCGTTTTTGCTCCTTTGTTGCAGAAGGCTTTTGTTTAG 498 0.4056 MAGTMKKVDKIRQIVRLKQLMTRWKQISLSRRSFRAEPEETTTTTTTSPCVTPRRQQPPSGFVFVYVGSERQRFTIPARFLNFPVFAGLLDVTEEEFGLRGNGGLVLPCHVDFFTEIVKRLHKNENKYGKFSLDAFVKMFSDVAFSCKEKENVVVFAPLLQKAFV* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0495 165 Pfam Auxin responsive protein 23 121 IPR003676 GO:0009733
Tpr3g0495 165 MobiDBLite consensus disorder prediction 39 53 - -
Tpr3g0495 165 PANTHER - 1 150 - -
Tpr3g0495 165 MobiDBLite consensus disorder prediction 33 53 - -
Tpr3g0495 165 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 1 150 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0495 Tpr-Chr3 5031999 5032944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0495 7 119 Calmodulin-binding Proteins AT3G43120 33.083 1.06e-19 79.0