Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g0489 | ATGGGGAGAAGAAAGTGTTCACATTGTGGTAAGATAGGACATAATTGTAGGACATGCACATCCTTCACCCTTGGAGTTGGAGGACTTCGTCTCTTTGGTGTCCAACTATCCTCCTCTAATTCATCTAATCATAATAATTCTACCATCATCAAGAAAAGCTTTAGCATGGATACCTTTCCATCACCATCCTCTCCATCTTCTTCATTCTCTTCATCAACATCATTAACCAATATTGATGATAATCATCATCATCATCATCATCATCATCACAAATCTACCTCTACTAATATTGCCTATCTATCAGATTGTTTTATAGGTCCACCCCAAGAGAGGAAAAAAGGAGTTTCATGGACAGAAGATGAGCATAGAATGTTTATGGTTGGACTAGAGAAAATGGGAAAAGGAGATTGGAGAGGTATCTCTAAAAACTTCGTTCCCACAAGAACCCCAACACAAGTCGCGAGTCATGCTCAAAAATACTTTCTCCGATTGTCAACTATCAATAACAAGAAGCGACGTTCAAGTCTCTTTGACTTGGTTGGGAGCAAGAACACTAACACAAAAGTCCAAGGCAACGCTAATTCAATAGTTTTGAGTCATAAATCAGAGAATAAGTGTAAATGTGAAGTTGAGATTAATGATGGCACAACTTTCTTTAAACAAGAAGTAGTCAAATCAGATAAGCAAGAAACTAATTACTCTCAAGTTAATTGGCTACATAATCACTCTTCAAAGTATGCAACAGTGCCTTATTTGGACCTCACACTTGCAGTTGCACCCCCTAAGAAGACTAATAAGACCACCCAAGCTGGCCCATTGCTTTTTGGCCCAATTAGTGTCACTTAA | 846 | 0.3842 | MGRRKCSHCGKIGHNCRTCTSFTLGVGGLRLFGVQLSSSNSSNHNNSTIIKKSFSMDTFPSPSSPSSSFSSSTSLTNIDDNHHHHHHHHHKSTSTNIAYLSDCFIGPPQERKKGVSWTEDEHRMFMVGLEKMGKGDWRGISKNFVPTRTPTQVASHAQKYFLRLSTINNKKRRSSLFDLVGSKNTNTKVQGNANSIVLSHKSENKCKCEVEINDGTTFFKQEVVKSDKQETNYSQVNWLHNHSSKYATVPYLDLTLAVAPPKKTNKTTQAGPLLFGPISVT* | 282 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g0489 | 281 | CDD | SANT | 116 | 161 | IPR001005 | - | |
Tpr3g0489 | 281 | ProSiteProfiles | Myb-like domain profile. | 109 | 161 | IPR001005 | - | |
Tpr3g0489 | 281 | PANTHER | MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN | 3 | 268 | - | - | |
Tpr3g0489 | 281 | SMART | sant | 113 | 163 | IPR001005 | - | |
Tpr3g0489 | 281 | Gene3D | - | 115 | 168 | - | - | |
Tpr3g0489 | 281 | PANTHER | TRANSCRIPTION FACTOR KUA1 | 3 | 268 | - | - | |
Tpr3g0489 | 281 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 112 | 163 | IPR006447 | GO:0003677 | |
Tpr3g0489 | 281 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 109 | 165 | IPR017930 | - | |
Tpr3g0489 | 281 | SUPERFAMILY | Homeodomain-like | 110 | 165 | IPR009057 | - | |
Tpr3g0489 | 281 | Pfam | Myb-like DNA-binding domain | 116 | 161 | IPR001005 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g0489 | Tpr-Chr3 | 4975321 | 4976897 | Dispersed/Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | MYB-related | Tpr3g0489 | Myb_DNA-binding | 9e-11 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g0489 | - | - | cam:101500241 | 296.589 |