Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0488 ATGAATAGACAAAAGGGTCATCATTATGATGAAGATATGAGTTCTTCTTCTTCTTCTTCTTCTAAGGTTATTGTTGTTGCTGTTAAAGCTTCAAAAGATATTTCAAGAACTGCTTTGGTTTGGGCTTTGACTCATGTTGTTCAACCTGGAGATTGCATTAAGCTTTTGGTTATCATTCCTGCACTTTCATCAAGAAAAAAAGTATGGGGGTTTTCAAGATTTACTACTGATTGTGCCACTAATCACTGGACATCGCGATTAGGAACGGTTTCAGATCAGAAAGAAGATATTACAAATTCATGTTCTCAATTAGTGCTTCAACTACATGATTTCTATGATCCTGAGAAGATAAAGATTAGAGTGAAGATTCTTTCTGGCTCTTCGTGTGGCGCGGTGGCTGCTGAAGCCAAGAGAGTGCAGTCAAGCTGGGTTATATTGGACAGAAAATTGAAAGGTGAAAAGAAATACTGCATGGACGAGCTGCATTGCAATATTGTAATTATGAAGCATTCTCACCCAAAGATTCTACGCTTGAATTTGAATAGTTCGCCTAAGAAGGAACTTGATAGAGATTGTACATTTTTGTTGGAGCCGAATGCATACACAAGAAGCTTAAAAGACAATTTTGAACATTCAGATATAATTAAAGGTCCATCAGTTACTCCGGCTAGTAGTCCAGAACAAGGCTCACCACCATTGACTGTAACTACTGATATTGGAACAGCGTCGATATCGAGCTCAGATCCTGGAACATCGCCATTTTTCCATTCTGACAATTACGAAAGACGGAGGAGATGTTTTCCCTTTGTTGTTCACGAGGGACTGACAAACCTCGAGGATATTGTATCTGACTCGGAGAGTGAAAAGCTAAGTTCATCATCCAAAAGTTCATCTTTTCAGCCATGGATTTCAAATATGATTTGTGTAGACGGCGAGTTCTCAAAACACGAAGAAAATATCAAAAGATCTAGTGATAAGTCTTTGGTTTCTACCTATGAATCTTTGCTTCAGAAATTGACGATGTTGGATCAAGATCATATCTATGGAAAGCCTACTTGTAAAATTGATGTGAACTTGAGCAAGAGTGTTAGAGAAGCAATTTCACTAGCCAGAAATGCACCTCATGGACCTCCTCCACTGTGCTCTATTTGTCAACACAAAGCACCTGCATTTGGGAATCCTCCAAGGTGGTTTACGTTTGCGGAACTACAGCTCGCCACAGGTGGTTTTTCGCAAGCAAACTTCTTGGCCGAAGGTGGTTTTGGTTCTGTACACCGTGGTGTCCTGCCAGACGGACAAGTTGTTGCTGTCAAGCAGTATAAATTAGCCAGTACTCAAGGAGATAAAGAATTTTGCTCAGAAGTAGAGGTCTTAAGCTGCGCACAACACCGCAATGTTGTGATGCTAACTGGTTTCTGTGTCGAGGATGGAAGAAGATTGCTAGTTTATGAGTATATCTGCAATGGATCGCTCGATTCTCATCTCTACGGACGAATGCAGAATGTGTTGGATTGGTCTGCACGCCAAAAAATTGCGGTTGGAGCAGCACGTGGTTTGAGATATCTTCATGAAGAATGTAGAGTTGGTTGCATTGTACACCGTGATTTGCGACCTAACAATATCCTCCTCACTCACGATTTTGAAGCATTAGTGGGAGATTTTGGACTTGCTAGGTGGCAACCAGACGGAGATATGGGCGTCGAAACTAGGGTGATAGGAACATTTGGGTATTTGGCACCAGAATATGCTCAAAGTGGTCAAATTACTGAAAAAGCTGATGTGTACTCATTTGGGATAGTATTACTGGAACTTGTGACCGGTCGGAAAGCTGTGGATATTAGTCGGCCGAGGGGCCAGCAATGCCTTAGTGAATGGGCACGCCCGTTGCTTGAAGAACAAGCCATTCATAAACTTGTAGATCCGAGCATAGGAAACAGCTATGTTGATCAAGAGGTTTATCGCATGATGCAGTGTTCCTCTATGTGCATTCGACGGGATCCTCATTTAAGGCCTCGTGTGTCTCAGGTGCTCAAGATGCTTGAAGGTGACATTCTCATGTGA 2061 0.4182 MNRQKGHHYDEDMSSSSSSSSKVIVVAVKASKDISRTALVWALTHVVQPGDCIKLLVIIPALSSRKKVWGFSRFTTDCATNHWTSRLGTVSDQKEDITNSCSQLVLQLHDFYDPEKIKIRVKILSGSSCGAVAAEAKRVQSSWVILDRKLKGEKKYCMDELHCNIVIMKHSHPKILRLNLNSSPKKELDRDCTFLLEPNAYTRSLKDNFEHSDIIKGPSVTPASSPEQGSPPLTVTTDIGTASISSSDPGTSPFFHSDNYERRRRCFPFVVHEGLTNLEDIVSDSESEKLSSSSKSSSFQPWISNMICVDGEFSKHEENIKRSSDKSLVSTYESLLQKLTMLDQDHIYGKPTCKIDVNLSKSVREAISLARNAPHGPPPLCSICQHKAPAFGNPPRWFTFAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVVAVKQYKLASTQGDKEFCSEVEVLSCAQHRNVVMLTGFCVEDGRRLLVYEYICNGSLDSHLYGRMQNVLDWSARQKIAVGAARGLRYLHEECRVGCIVHRDLRPNNILLTHDFEALVGDFGLARWQPDGDMGVETRVIGTFGYLAPEYAQSGQITEKADVYSFGIVLLELVTGRKAVDISRPRGQQCLSEWARPLLEEQAIHKLVDPSIGNSYVDQEVYRMMQCSSMCIRRDPHLRPRVSQVLKMLEGDILM* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0488 686 CDD STKc_IRAK 416 682 - -
Tpr3g0488 686 PANTHER OS01G0253100 PROTEIN 19 686 IPR045271 GO:0004714|GO:0006468
Tpr3g0488 686 SMART tyrkin_6 410 680 IPR020635 GO:0004713|GO:0006468
Tpr3g0488 686 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 19 686 - -
Tpr3g0488 686 Gene3D Phosphorylase Kinase; domain 1 382 485 - -
Tpr3g0488 686 ProSiteProfiles Protein kinase domain profile. 410 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0488 686 Pfam Protein tyrosine and serine/threonine kinase 414 680 IPR001245 GO:0004672|GO:0006468
Tpr3g0488 686 ProSitePatterns Tyrosine protein kinases specific active-site signature. 531 543 IPR008266 GO:0004672|GO:0006468
Tpr3g0488 686 Gene3D Transferase(Phosphotransferase) domain 1 486 684 - -
Tpr3g0488 686 SUPERFAMILY Protein kinase-like (PK-like) 391 681 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0488 Tpr-Chr3 4958088 4962675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0488 372 676 Trihelix Transcription Factor Family AT1G68690 51.780 1.64e-103 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Tpr3g0488 PK_Tyr_Ser-Thr 1.5e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0488 - - aprc:113855006 1157.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0488 3 4958088 4962675 Tpr3g0488 3 4958088 4962675 ECH