Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0462 ATGATGAATAATAAGATGAGCAACGTTAGTAGCTCTGATCTCATAGATTCTAAGCTTGAAGAGCATCAGTCGTGTGGATCCAAACACTGTCCTCGCTGCGGACACAAGTTCGATCAAGGAAAGCCGGATTGGCTAGGTCTACCAGCAGGAGTGAAATTTGATCCAACAGATCAAGAACTCATTGAACATCTTGAAGCTAAAGTTGAATCAAAGAACATGAAATCACACCCTTTGATAGATGAATTCATTCTCACTATTGAAGGAGAAGATGGAATTTGTTACACCCATCCTGAAAAACTTCCAGGAGTGACAAGAGATGGATTAAGCAGACACTTTTTCCATAGACCATCAAAGGCATATACAACAGGAACAAGAAAGAGAAGAAAGATTCAAACTGAAGAATGTGACTTACAAGGAACATCATCAGGAGGAGAAACAAGATGGCATAAAACTGGTAAGACAAGACCTGTTATGGTTAATGGAAAACAAAAAGGTTGCAAGAAAATTCTTGTCCTCTACACTAATTTCGGGAAGAATCGAAAACCGGAGAAGACGAATTGGGTGATGCATCAATATCATTTAGGACAACATGAAGAAGAGAAAGAAGGAGAACTTGTTGTTTCAAAGATATTTTATCAGACACAACCAAGACAGTGTAATTGGTCTGATAATAATAATAATCATAGGATTGGTGCAACAATAGCAACAACTGGTGAAGGAAGTGGTGGAGGAGAAGCTAGTAATAATTATGGAAGAAGAGATAGTGGAAGTGGAAGTTCTTCTTCTAAGGAAATTGTTACTCATAATCATAGTCATGGTGGTCACATTCATAGAGATGAAATGTCTGCTGTTGTTGGTGTTAATCCTTTAACAAGCTTCACAAATGCTGCCTTGGATATTCAACACCTTAAATCCGATCATTTCGGCTTCCTCCCGTTTCGAAAAAGCACATTCGATGAGGTTGGAATAGGAGAGGGTTCTTCAGCAAGAGAAATGCAAGCATCAGGAGGGTCATGTGATCAAGAGCAGCAGCAGCAGCATGTAGTAGTACATCATCATCATCATCAACAACAACATCAACAACAACAGCATCAACATCAACATCATCAACAACATGAGATTCATGCACATCAACAGATTAATGCAAACACAGCTTTCCATATAAGTAGGCCTTCAAATCCAATCTCAACTATTATATCTCCACCTCCACTTCACCATACTACATCCATCATCCTTGATGATAATTCTTATCATGTCTCAACAATTATGCTCCAACAAAATGAAAATTTTCAGCAACATCAACAACAACATCATAAATTAGGTGGTGGAAGGTCTGCGTCTGGTTTAGAGGAAGTCATTATGGGGTGCACTTCAACGTCGTCTGATACTATCAAAGAGGAATCATCTATTAGAAACCAACAAGAAGCTGAGTGGTTGAAATACTCTTCTTACTGGCCAGTTGACCCTCATGACAACCCCAACCATCATCATGGTTAG 1497 0.3901 MMNNKMSNVSSSDLIDSKLEEHQSCGSKHCPRCGHKFDQGKPDWLGLPAGVKFDPTDQELIEHLEAKVESKNMKSHPLIDEFILTIEGEDGICYTHPEKLPGVTRDGLSRHFFHRPSKAYTTGTRKRRKIQTEECDLQGTSSGGETRWHKTGKTRPVMVNGKQKGCKKILVLYTNFGKNRKPEKTNWVMHQYHLGQHEEEKEGELVVSKIFYQTQPRQCNWSDNNNNHRIGATIATTGEGSGGGEASNNYGRRDSGSGSSSSKEIVTHNHSHGGHIHRDEMSAVVGVNPLTSFTNAALDIQHLKSDHFGFLPFRKSTFDEVGIGEGSSAREMQASGGSCDQEQQQQHVVVHHHHHQQQHQQQQHQHQHHQQHEIHAHQQINANTAFHISRPSNPISTIISPPPLHHTTSIILDDNSYHVSTIMLQQNENFQQHQQQHHKLGGGRSASGLEEVIMGCTSTSSDTIKEESSIRNQQEAEWLKYSSYWPVDPHDNPNHHHG* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0462 498 MobiDBLite consensus disorder prediction 343 375 - -
Tpr3g0462 498 PANTHER NAC DOMAIN-CONTAINING PROTEIN 75 3 472 - -
Tpr3g0462 498 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 3 472 IPR044799 GO:0003700
Tpr3g0462 498 SUPERFAMILY NAC domain 43 213 IPR036093 GO:0003677|GO:0006355
Tpr3g0462 498 Gene3D NAC domain 56 217 IPR036093 GO:0003677|GO:0006355
Tpr3g0462 498 MobiDBLite consensus disorder prediction 234 276 - -
Tpr3g0462 498 MobiDBLite consensus disorder prediction 234 267 - -
Tpr3g0462 498 Pfam No apical meristem (NAM) protein 48 194 IPR003441 GO:0003677|GO:0006355
Tpr3g0462 498 ProSiteProfiles NAC domain profile. 47 213 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0462 Tpr-Chr3 4726348 4732771 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0462 10 494 NAC Transcription Factor Family AT5G56620 47.515 1.41e-128 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr3g0462 NAM 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0462 - - mtr:MTR_8g102240 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0462 3 4726348 4732771 Tpr3g0462 3 4726348 4732771 ECH