Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0461 ATGAGGATCGAGGAATTGGAAGATGCAGAGTGTAGTAGGCATGAAGAAGAGAATTCCGAGAGGCAAATTGTGATGGTTGATGCAAAGAGAGCGTTGGTTGGAGCAGGTGCAAGGATCTTGTTTTATCCAACACTTTTGTATAACGTGGTTCGTAATAAAATTGAAACTGAGTTTAGGTGGTGGGATCAAATTGATGAGTTTTTGTTGCTGGGCGCAGTCCCGTTCCCTAAAGATGTTCCTGAATTGAAGAATCTTGGTGTTGGCGGTGTGATTACTTTGAATGAACCTTATGAAACTTTGGTACCATCTTCATTATATCGCGCTCACGGGATCGATCATTTGGTAATTCCCACAAGGGATTATCTCTTTGCTCCCTCATTCGTGGATATCAACCGGGCAGTGCAGTTCATTCATTATAATGCAACTTGTGGTAAAACAACTTATGTTCACTGTAAAGCTGGGAGGGGGAGGAGTACAACAATTGTGCTTTGTTATTTGGTTGAATACAAGCACATGACACCTGCTGCTGCTCTGGATTATGTGCGGTCTCGAAGACCTAGAGTGCTACTGGCACCCTCACAGTGGAAGGCTGTTCAAAACTATAACAAGCAAAGACCTGCTCAAAATAATAACAAGCAAATATCTGTTCAAAACTGTAACAAGCAAAGACCATGTTCTTCACCATACTCTCCCTCTGGGGACACGGTTCTCATAACCAAAGATGATCTTGAAGGTTATCATAGCACATCTGATACTAGTATGGAGCTGGCTATTGTTCCTAAAGTGGCAAAGACTAAGCCCATGATAGCAAGACTATCTTGCCTGTTCGCATCTTTAAAGGTATCCGGTGGTAGTGTACCAATGATAAGGCGGCTGCCCGTTTCAGAGTCACGTGCTTGCTAA 903 0.4308 MRIEELEDAECSRHEEENSERQIVMVDAKRALVGAGARILFYPTLLYNVVRNKIETEFRWWDQIDEFLLLGAVPFPKDVPELKNLGVGGVITLNEPYETLVPSSLYRAHGIDHLVIPTRDYLFAPSFVDINRAVQFIHYNATCGKTTYVHCKAGRGRSTTIVLCYLVEYKHMTPAAALDYVRSRRPRVLLAPSQWKAVQNYNKQRPAQNNNKQISVQNCNKQRPCSSPYSPSGDTVLITKDDLEGYHSTSDTSMELAIVPKVAKTKPMIARLSCLFASLKVSGGSVPMIRRLPVSESRAC* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0461 300 CDD PTPMT1 60 204 IPR044596 GO:0004721
Tpr3g0461 300 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 128 196 IPR000387 GO:0016311|GO:0016791
Tpr3g0461 300 PANTHER - 1 300 - -
Tpr3g0461 300 PANTHER OS01G0739200 PROTEIN 1 300 - -
Tpr3g0461 300 Pfam Dual specificity phosphatase, catalytic domain 83 203 IPR000340 GO:0008138|GO:0016311
Tpr3g0461 300 ProSiteProfiles Dual specificity protein phosphatase domain profile. 60 207 IPR020422 GO:0006470|GO:0008138
Tpr3g0461 300 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Tpr3g0461 300 Gene3D Protein tyrosine phosphatase superfamily 60 209 IPR029021 -
Tpr3g0461 300 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 203 IPR029021 -
Tpr3g0461 300 SMART dsp_5 63 204 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0461 Tpr-Chr3 4720036 4722550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0461 1 288 Protein tyrosine phosphatase (PTP) family AT2G35680 50.765 2.43e-103 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0461 - - gmx:100817410 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0461 3 4720036 4722550 Tpr3g0461 3 4720036 4722550 ECH