Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0452 ATGGGTAAAACCATAAGGTGGTTTAAGAGTTTGTTTGGGATAAAGAAAGATAATTCAAATTCAAATTCAAATTCTTCAAGCAACAAATTGAATCCTTCTCCTTTTGAGGCTTTCTCAAAGAGAGATTCAAGAGGTTTGTGTCATAATCCATCTACTATACCACCCAACATTTCACCTGCAGAAGCTGCTTGGGTTCAATCCTTCTACTCAGATACCGAGAAGGAGCAAAACAAGCATGCTATTGCGGTCGCAGCTGCCACGGCAGCAGCTGCAGATGCTGCCGTGGCAGCTGCTCAAGCTGCCGTGGCTGTCGTTAGATTAACCAGTCACGGCAGAGACACTATGTTTGGTGGCGCTGGCGCACACCAGAAATTTGCAGCTGTCAAGATTCAAACCACATTTAGGGGTTTCTTGGCAAGAAAAGCATTGAGAGCATTAAAGGGTTTGGTAAAGTTACAAGCAGTAGTGAGAGGGTACTTAGTGAGGAAGCAAGCAACAGCAACACTACACAGTATGCAGGCACTAATTAGAGCACAAGCAACAGTAAGGTCTCATAAATCTCGTGGACTCATCATAAACACAACAAAGAATGAAACACATAACAACAGATTTCAAACACAAGCAAGAAGATCCACGGAAAGGTACAATCACAATGACAGTAATAGGAATGAGTATACAGCTTCAATTCCAATTCACAGTAGAAGATTATCATCTTCTTTTGATGCTACTGTGAATAACAGTTATGATATTGGAAGTCCAAAAATAGTAGAAGTTGATACTGGTAGACCAAAATCAAGGTCTAGAAGGAGTAACACATCAATTTCAGATTTTGGCGACGACCCGTCATTTCAAACACTTTCATCTCCACTACCAATTACACCTTCTCAGTTATTCATTCCAAATCAAAGAAATTTCAATGAAACAGAATGGGGAATAACAGGGGAAGAATGCAGATTTTCAACCGCGCAGAGCACTCCGCGGTTTGCAAGTTCTTGTAGTTGTGGATTTGTTGCACCTTCCACACCTAGAACAATTTGTGGAGATAGTTTTTATGTTGGTGAGTATGGTAACTATCCTAATTACATGGCTAATACACAGTCTTTTAAGGCTAAATTGAGGTCTCATAGTGCTCCTAAACAACGACCTGAACCCGGTCCTAAGAAGAGACTTTCATTGAATGAATTGATGGAATCTAGAAACAGTTTGAGTGGTGTTAGAATGCAGAGATCTTGTTCACAGATTCAGGATGCTATTAATTTTAAGAATGCTGTGATGAGTAAATTCGATAAGTCTACCGAATTTGATAGAAACTTCTCCACCCAAAGGAGGTGGTGA 1335 0.4037 MGKTIRWFKSLFGIKKDNSNSNSNSSSNKLNPSPFEAFSKRDSRGLCHNPSTIPPNISPAEAAWVQSFYSDTEKEQNKHAIAVAAATAAAADAAVAAAQAAVAVVRLTSHGRDTMFGGAGAHQKFAAVKIQTTFRGFLARKALRALKGLVKLQAVVRGYLVRKQATATLHSMQALIRAQATVRSHKSRGLIINTTKNETHNNRFQTQARRSTERYNHNDSNRNEYTASIPIHSRRLSSSFDATVNNSYDIGSPKIVEVDTGRPKSRSRRSNTSISDFGDDPSFQTLSSPLPITPSQLFIPNQRNFNETEWGITGEECRFSTAQSTPRFASSCSCGFVAPSTPRTICGDSFYVGEYGNYPNYMANTQSFKAKLRSHSAPKQRPEPGPKKRLSLNELMESRNSLSGVRMQRSCSQIQDAINFKNAVMSKFDKSTEFDRNFSTQRRW* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0452 444 MobiDBLite consensus disorder prediction 267 282 - -
Tpr3g0452 444 Pfam Protein of unknown function (DUF4005) 334 404 IPR025064 -
Tpr3g0452 444 Pfam IQ calmodulin-binding motif 150 164 IPR000048 GO:0005515
Tpr3g0452 444 Pfam IQ calmodulin-binding motif 126 144 IPR000048 GO:0005515
Tpr3g0452 444 MobiDBLite consensus disorder prediction 255 282 - -
Tpr3g0452 444 ProSiteProfiles IQ motif profile. 123 151 IPR000048 GO:0005515
Tpr3g0452 444 PANTHER IQ-DOMAIN 5-RELATED 1 432 - -
Tpr3g0452 444 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 432 - -
Tpr3g0452 444 SMART iq_5 145 166 IPR000048 GO:0005515
Tpr3g0452 444 SMART iq_5 122 144 IPR000048 GO:0005515
Tpr3g0452 444 MobiDBLite consensus disorder prediction 202 228 - -
Tpr3g0452 444 Gene3D - 120 170 - -
Tpr3g0452 444 ProSiteProfiles IQ motif profile. 147 174 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0452 Tpr-Chr3 4674027 4676183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0452 1 407 IQD Protein Family AT3G16490 49.639 1.01e-93 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0452 - - mtr:MTR_8g102400 726.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0452 3 4674027 4676183 Tpr3g0452 3 4674027 4676183 ECH