Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0443 ATGCGTGTGCCATCAAATAAACTTACAACAAATTTCCTAACACGTGTCACTTTCTTACATGTCCTTTCTTCTTCTTTTATCGTCTCCTCTCTCTCTCACTTTCACTCAACTGCTAGCTGCGTTATGGAACCTTTGGACGATTCAGATGCGCAACTCGAACGAGTTGACTCTGATCAGTTAACGTCCACAAGCTCTGGTTCAGGCATTTCCTCCGTATTCAGCACTGAAGATTTCCGTAACTTCAACAGTTCCGGCGACATTTCCTCTATCAGTAGCGGTTCAGGTGAGATTTCAACATTCACGGTTAACCGTCTGATTCTTGCACCTCCGTTGATTTCTGTGTCCAGTGAAGGTGATAACGTCACTGTCGCTCCGGAAGAAGTTGTTATGATGGCGGTGAGGGAGAAGTGCGTGGGAAGGAATAACAAGGGAGTGAGTTGGGGACATACTTCGGTGATTGGAAGGCGGAAAGAGATGGAGGACGCTATCGCCGTTATTCCGGGATTTATGTCTCGCACTTGCGATCACGTTGGCGGTTGCACAGCTCCCGGTTCTAGATCCTCCGGTGAGATCACTCCTGTTCATTTCTTCGGCGTTTACGACGGCCACGGTGGCTCTCAGGTTGCTAAATTTTGTGCCAAGCGAATGCACAGTGTTATAGCAGAGGAGTGGGAGCGAGAAATAGCATATGGCGCTGAATGGCAGAGAAAGTGGGAAGCTGTATTTGCTAATGGCTTTGAGAGGACTGACAAGGAAATCGAATCAGATGAAGTTGCACCAGAAATGGTTGGATCTACTGCCTCTGTGGTTGTTCTATCTGGTTGCCAAATTATTACATCAAACTGTGGCGACTCAAGGGCCATTCTTTGCCGCAGGACTGAAACAGTCCCATTGACTGTGGATCAAAAGCCTGATAGAGAGGATGAACTCTTGAGAATTGAAGGAGAAGGAGGAAAAGTCATAAACTGGAATGGAGCTAGGGTGTTTGGTGTTCTTGCAATGTCCAGGGCCATAGGTGATCGATACTTGAGACCATGGATTATCCCGGTTCCAGAGATTACTTTTACAACAAGAACTGATGAGGATGAGTGTTTAATTTTGGCAAGTGATGGACTTTGGGACGTAATGACGAATGAGGAGGTAGGAGAAGTGGCGCGCCACATTCTAAGAAGGCGCCGCAGATCTTTGTCAATGGAGGAAATATCTCCAACACAAATTGTTGCTGATAGCCTCACTGAAATTGCCTGTGGTAGAAATAGTAAAGATAACATTTCAATCATAGTTGTTGATTTGAAAACAAAGAGAAAACGTCTGCAAAGGCCTCCTTCAATTTCCTAA 1338 0.4574 MRVPSNKLTTNFLTRVTFLHVLSSSFIVSSLSHFHSTASCVMEPLDDSDAQLERVDSDQLTSTSSGSGISSVFSTEDFRNFNSSGDISSISSGSGEISTFTVNRLILAPPLISVSSEGDNVTVAPEEVVMMAVREKCVGRNNKGVSWGHTSVIGRRKEMEDAIAVIPGFMSRTCDHVGGCTAPGSRSSGEITPVHFFGVYDGHGGSQVAKFCAKRMHSVIAEEWEREIAYGAEWQRKWEAVFANGFERTDKEIESDEVAPEMVGSTASVVVLSGCQIITSNCGDSRAILCRRTETVPLTVDQKPDREDELLRIEGEGGKVINWNGARVFGVLAMSRAIGDRYLRPWIIPVPEITFTTRTDEDECLILASDGLWDVMTNEEVGEVARHILRRRRRSLSMEEISPTQIVADSLTEIACGRNSKDNISIIVVDLKTKRKRLQRPPSIS* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0443 445 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 99 440 - -
Tpr3g0443 445 SUPERFAMILY PP2C-like 139 432 IPR036457 -
Tpr3g0443 445 PANTHER ALPHABET, ISOFORM E-RELATED 99 440 - -
Tpr3g0443 445 ProSiteProfiles PPM-type phosphatase domain profile. 146 431 IPR001932 -
Tpr3g0443 445 CDD PP2Cc 148 431 IPR001932 -
Tpr3g0443 445 Pfam Protein phosphatase 2C 154 424 IPR001932 -
Tpr3g0443 445 Gene3D - 136 440 IPR036457 -
Tpr3g0443 445 SMART PP2C_4 135 429 IPR001932 -
Tpr3g0443 445 ProSitePatterns PPM-type phosphatase domain signature. 196 204 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0443 Tpr-Chr3 4596147 4601750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0443 147 441 PP2C-type Phosphatase Gene Family AT4G26080 51.429 1.12e-100 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0443 K14497 - gmx:100793293 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0443 3 4596147 4601750 Tpr3g0443 3 4596147 4601750 ECH