Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0420 ATGGCTACTTCAATTCGACCCACTCTTTCTTCCTTTACCCTTTCACCTCTCTTCAATCGTTCTCCTCGAGTCTCTTTCTCCCATTTTTCTACCGTTCCACAATCCCATAGTCTTGGCTTAAAATTGGTCAGAAAAAATGGAAACTCTATGAGAGTGATGGCATCTGGGAACGTGTCTTCATCAGTCACAGCTGCTTCATCAGAAAATCTACTTGAATGGGTCAAACAAGATAAAAGAAGATTGCTTCATGTTGTTTATCGTGTTGGGGACTTGGATAGAACCATTAAATTTTATACTGAGTGTCTGGGAATGAAGCTACTCCGAAAGCGCGACATACCGGAGGAGAAATATACTAATGCTTTTCTTGGATATGGACCTGAAGACTCACATTTTGTTATTGAACTCACATACAATTACGGAGTTGACAAGTATGACATTGGAACTGCATTTGGCCATTTTGGTATTGCGGTCGATGATATTACAAAAACAGTGGAACTAATAAGAGCTAAGGGTGGCAAAATAACTAGAGAGCCTGGTCCTGTCAAAGGAGGCAAAACAGTAATTGCATTTGTTGAAGACCCTGATGGTTACAAATTCGAACTTTTGGAAAGAGGTCCCACTCCTGAGCCATTGTGCCAAGTGATGCTTCGAGTGGGTGATCTTAACCGTTCAATAGAATTTTACGAGAAGGCTTTTGGTATGGAGCTGCTTCGCACACGGGATAATCCAGAGTCCAAGTATACCATAGCAATGCTGGGTTATGGCCCAGAAGATAAAAATGCTGTTCTGGAGTTGACTTACAATTATGGAGTCACTGAATATGATAAAGGAAATGCTTATGCTCAGATTGCAATAGGCACAGATGATGTGTACAAAACTGCGGAAGCGATTAAACTATCCACAGGAAAGCTTACACGGGAACCTGGACCGCTGCCTGGTATCAGCACAAAAATTACTGCATGCTTGGATCCCGATGGATGGAAGACGGTTTTTGTAGATAATATTGATTTTCTTAAGGAGTTGGAGTAG 1029 0.415 MATSIRPTLSSFTLSPLFNRSPRVSFSHFSTVPQSHSLGLKLVRKNGNSMRVMASGNVSSSVTAASSENLLEWVKQDKRRLLHVVYRVGDLDRTIKFYTECLGMKLLRKRDIPEEKYTNAFLGYGPEDSHFVIELTYNYGVDKYDIGTAFGHFGIAVDDITKTVELIRAKGGKITREPGPVKGGKTVIAFVEDPDGYKFELLERGPTPEPLCQVMLRVGDLNRSIEFYEKAFGMELLRTRDNPESKYTIAMLGYGPEDKNAVLELTYNYGVTEYDKGNAYAQIAIGTDDVYKTAEAIKLSTGKLTREPGPLPGISTKITACLDPDGWKTVFVDNIDFLKELE* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0420 342 PANTHER LACTOYLGLUTATHIONE LYASE 15 342 - -
Tpr3g0420 342 Gene3D - 207 342 IPR029068 -
Tpr3g0420 342 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 79 209 IPR029068 -
Tpr3g0420 342 ProSitePatterns Glyoxalase I signature 1. 213 234 IPR018146 GO:0004462|GO:0046872
Tpr3g0420 342 PANTHER LACTOYLGLUTATHIONE LYASE, CHLOROPLASTIC-RELATED 15 342 - -
Tpr3g0420 342 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 210 334 IPR037523 -
Tpr3g0420 342 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 80 204 IPR037523 -
Tpr3g0420 342 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 211 334 IPR029068 -
Tpr3g0420 342 CDD GlxI_Ni 81 202 - -
Tpr3g0420 342 ProSitePatterns Glyoxalase I signature 2. 147 159 IPR018146 GO:0004462|GO:0046872
Tpr3g0420 342 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 81 201 IPR004360 -
Tpr3g0420 342 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 213 328 IPR004360 -
Tpr3g0420 342 ProSitePatterns Glyoxalase I signature 1. 83 104 IPR018146 GO:0004462|GO:0046872
Tpr3g0420 342 Gene3D - 50 205 IPR029068 -
Tpr3g0420 342 TIGRFAM glyox_I: lactoylglutathione lyase 66 213 IPR004361 GO:0004462|GO:0046872
Tpr3g0420 342 TIGRFAM glyox_I: lactoylglutathione lyase 211 334 IPR004361 GO:0004462|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0420 Tpr-Chr3 4430988 4436069 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0420 213 331 Calmodulin-binding Proteins AT1G08110 28.276 6.18e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0420 K01759 - gmx:100775714 593.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0420 3 4430988 4436069 Tpr5g0097 5 1506729 1511585 PCT