Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0414 ATGTCTGTGCCAGTGGAACAAGGTGGTTATGGTGGTTGTTTGAAAGAGGTTCCTTCAATGGAAACTACTGAGAGGAACATTGGATTGAACCTCAAAGCTACTGAACTGAGGCTTGGGTTACCAGGCTCTGAATCTCCTGAGAGAGAAAATGGTGGGTTGTCTATGCTTAAGAGTTTGGTGTCTGGTGCTAAAAGGGGTTTCTCTGATGCTATTGATGGAGGTTCTGGGAAATGGGTTTTGTCTGGAAATGGTGGATCTGAAGTGGGGTTGTGTAAAGATGGAAACTTGTTTTCTCCTAAAGCTAAAGGTGGTGTTGGTGAATGCAACAAACAACAAAACCCTTTCTCTGCTGCCTCAGTTGTTAAAGAATCTGTTCCACACTCTCCAAAGCCTTTGCATGATAACAAACCACAGATTTCTTCTCCTCCTTCTGCAAAGGCGCAAGTTGTAGGATGGCCACCAATCCGATCTTTCAGGAAGAACTCAATGGCTACTCCACCTCAAAAGAATGATGCTGATGCAGAAGCCAAATCTGAATGCCTCTATGTAAAAGTCAGCATGGAAGGTGCTCCATACTTGAGGAAAGTGGATCTGAATGGTTTTAGCTCTTATAGGGAACTTTCTTCGGCACTCGAAAAGATGTTCAGTTGTTTTACAATCAGTCAATGTGGATCATATGGAGTTTCTTGTCAAGAAAAAATTTTAAGTGAAAGTAGATTGGTGGATCTTCTTCATGGTTCGGAATATGTGCTTACCTATGAAGACAAGGATGGTGATTGGATGCTAGTTGGTGATGTTCCATGGGAAATGTTCACCGAGTCTTGCAAGAGGCTGAGGATAATGAAGAGCTCTGAAGCAATTGGACTAGCACCTCGAGCCATGGAAAAGTGCAAAAGTCGCAACTAG 906 0.4305 MSVPVEQGGYGGCLKEVPSMETTERNIGLNLKATELRLGLPGSESPERENGGLSMLKSLVSGAKRGFSDAIDGGSGKWVLSGNGGSEVGLCKDGNLFSPKAKGGVGECNKQQNPFSAASVVKESVPHSPKPLHDNKPQISSPPSAKAQVVGWPPIRSFRKNSMATPPQKNDADAEAKSECLYVKVSMEGAPYLRKVDLNGFSSYRELSSALEKMFSCFTISQCGSYGVSCQEKILSESRLVDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRIMKSSEAIGLAPRAMEKCKSRN* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0414 301 Pfam AUX/IAA family 34 292 IPR033389 -
Tpr3g0414 301 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 21 294 IPR003311 GO:0005634|GO:0006355
Tpr3g0414 301 SUPERFAMILY CAD & PB1 domains 178 282 - -
Tpr3g0414 301 ProSiteProfiles PB1 domain profile. 180 283 IPR000270 GO:0005515
Tpr3g0414 301 Gene3D - 174 295 - -
Tpr3g0414 301 MobiDBLite consensus disorder prediction 124 149 - -
Tpr3g0414 301 PANTHER AUXIN-INDUCED PROTEIN 21 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0414 Tpr-Chr3 4385336 4388450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0414 130 291 B3 DNA Binding Superfamily AT4G23980 25.926 2.77e-09 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Tpr3g0414 AUX_IAA 4e-85 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0414 K14484 - gmx:100803754 433.335
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0414 3 4385336 4388450 Tpr3g0414 3 4385336 4388450 ECH