Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0412 ATGAATAGAGGTGTTAATCTACAAAGCTCACCAGTGCAACAAATGATGGCTGGAAACCCTAACAACTGGTGGAACTCCATGCGCCCGCCGGCACCTGATCATCATCATCACCAACCTTTCTTCTCCACTACTACTACTACTACTAGTCCTTCTCCTTCTAATTACTTTGTAACTCCGTATCCTACTTCATCTTCTCTTCCTCTTCCTTCTTGGCATGAAAATCAAGATCAACTACCTGAGTCATGGAGTCAACTACTCATGAGTGGTGGGGTGGTGTATGAAGAAGATAAGGAACAAATTATGCTAAGTCAGCCTCTTTCAAATGCTTCTTCTCTTGTTGATCATGTCAAACAAGAAACTTCAGTGAACAACTATGTTTATGGAAATGAAGAATTTCATGGAACAACAAATTCTAGTACTTGGTCTCAAATAGTGTCGGTGCCTTCTTCTTCTTCCTCCAAATCTAGCATGTTGGATTTTTCTAACAATAAATTTGATACAAGATCTCCACCATCAGATCCATCTTCTGACCAGTGCAATAGTGGTGCAACTGGTGGGGCATTGAAGAAAGCTAGGGTTCAACCATCTACAACTCAGCCTACCTTCAAGGTTAGGAAGGAGAAGTTAGGTGACAGAATTACTGCCCTTCATCAACTAGTTTCCCCATTTGGAAAGACTGACACAGCATCTGTCTTATTAGAATCAATTGGTTATATCAGATTCCTTCAGAGTCAAATTGAGGCACTTAGTTTACCATACTTGGGAAATGGATCAGTAGGAGGAGGAAACATCAAGAACCAACAACAACAATATGTTCAAGGTGAGAAGAATTGTTTTTTCCCTGAACACCCTGGTCAGCTTCTGAATGAAAACTGTTTGAAGAGAAAGGCCAGTGAGCAGGATTGTGAAGAAGAAGAAAAGAAGGACTTGAGGAGTAGAGGATTATGTTTGGTTCCAGTTTCATGCACACTACAAGTTGGAAGTGACAATGGAGCTGATTATTGGAATTCTAGTTTTGGTGGTGGATATCAGTAG 1035 0.4068 MNRGVNLQSSPVQQMMAGNPNNWWNSMRPPAPDHHHHQPFFSTTTTTTSPSPSNYFVTPYPTSSSLPLPSWHENQDQLPESWSQLLMSGGVVYEEDKEQIMLSQPLSNASSLVDHVKQETSVNNYVYGNEEFHGTTNSSTWSQIVSVPSSSSSKSSMLDFSNNKFDTRSPPSDPSSDQCNSGATGGALKKARVQPSTTQPTFKVRKEKLGDRITALHQLVSPFGKTDTASVLLESIGYIRFLQSQIEALSLPYLGNGSVGGGNIKNQQQQYVQGEKNCFFPEHPGQLLNENCLKRKASEQDCEEEEKKDLRSRGLCLVPVSCTLQVGSDNGADYWNSSFGGGYQ* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0412 344 MobiDBLite consensus disorder prediction 166 183 - -
Tpr3g0412 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 203 253 IPR036638 GO:0046983
Tpr3g0412 344 Coils Coil 293 313 - -
Tpr3g0412 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 193 242 IPR011598 GO:0046983
Tpr3g0412 344 MobiDBLite consensus disorder prediction 166 202 - -
Tpr3g0412 344 Gene3D - 201 252 IPR036638 GO:0046983
Tpr3g0412 344 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 16 330 - -
Tpr3g0412 344 CDD bHLH_AtbHLH_like 200 250 IPR045239 -
Tpr3g0412 344 PANTHER OS05G0228400 PROTEIN 16 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0412 Tpr-Chr3 4351956 4356308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0412 1 287 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 40.223 3.29e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0412 - - gmx:100785156 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0412 3 4351956 4356308 Tpr3g0412 3 4351956 4356308 ECH
Tpr3g0412 3 4351956 4356308 Tpr5g0075 5 1180462 1190858 PCT