Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0411 ATGGCTAAAAAATACCAAGGAAAAGCTATTGGAATAGACCTCGGAACAACGAATTCATGTGTTGCTGTGTGGCTAGATGAACACAACAGAGTTGAGATTATTCACAATGATCAAGGCAGCAAAACAACACCTTCTTTTGTTGCTTTCACCGATTATCAAAGGTTGATTGGTGATGCTGCTAAGAATCAAACTGCGTCCAACCCCCAAAACACTGTCTTTGATGCTAAGAGGTTAATTGGTAGGAAGTTTAGTGATTCTGTTGTTCAAAATGATATGATGGTGTGGCCATTCAAGGTTGTTTCCGGAGTTGATGACAAACCGATGATATCTGTTAAGTACAAGGGACAAGAGAAACACCTATGTGCCGAAGAAATTTCATCTATGATTCTAACAAGGATGCGCGAGATTGCAGAGACTTTTTTGGAATCACCTGTCACAAATGCAGTTATTACTGTGCCTGCTTATTTCAATGATTATCAGCGGAAAGCCACCATAGATGCCGGTGCCATTGCTGGTCTTAATGTTATGAAGATAATCAACGAACCCACTGCGGCAGCTATTGCATATGGACTGGACAAAAGAATTAACTGTGTGGGAAGAAAACGAAATATTTTCATCTTTGACCTGGGTGGTGGGACTTTTGATGTGTCTATCGTTACGATTAAGGATGAAGTGATTCATTCGAAAAAAACAATTAAGGATACAGTCTTGGATTTATTAAAAAATAAAAAGGATAAGGTCATCCAAGTGAAGGCCACCGCCGGAAACACTCACCTCGGGGGAGAGGACTTTGACAGTAGGATGGTGAACTACTTTGCAAGGGAGTTTAAGAAGAAGACTAATGTGGACATTACCAGAAACCCAAGAGCTTTAAGGAGGTTGAGAAGAGAGTGCGAGAGAGCAAAAAGGACACTATCTTTTGCTCTTGTCGCCAACATTGAGATAGATTCTTTATTTGAGGACATTGATTTCTTTTCATCAATCACTCGTTCTATGTTTGAGGAAATCAATATGGATCTTTTCAACGAGTGCTTGAAAATTGTCGAGACTTGTCTCATTGATGCCAAGATGGACAAGAGTGATATACATCATGTTGTTCTTGTTGGCGGCTCCTCTAGAATTCCAAAACTACAACAACTCCTCCAGGAATTTTTTGCAGGGAAGGATCTGTGTAAGAGCATTAACCCCGATGAAGCTGTTGCTTATGGTGCAGCTGTGCAGGCTGCTTTGTTGAGCGGAGGCTTTAAAAATGTACCAAACTTGGTTATACAAGACGTTACACCTTTGTCTCTCGGTATCTCTCTTAAAGGTCATATCATGGGTGTTGCAATTCCTAGGAACACTAGCATTCCCATAAAAATAACAAAACGTTGTGAGACAGTTTATGATAACCTAGATGCTGTTGGTATTGAGGTTTATGAGGGTGAGAGAGCAAGAGCAAGTGACAACAATCTGCTTGGTTCTTTTGTTCTTTCCGGCCTCCCACGTGCTCCTCGAGGTCACCCTATAGATGTATGCTTTGACATTGATGAAAATGGTATCTTAACTGTTTCTGCTTATGTAAAATCAACTGGCAGTAAAAACAAGATTACAATAACTAATAACAAAGAAAGATTGTCATCATCTCAAGAAATTAAAGAAAAGATCAGAGAAGCTGAAAAGTACCGCGTTGAAGATGAGAAATTTCTAAGGAGGGCCAAGCTAATGAATAAATTAGATGACTGCGTTTACAAGTTGAGGAATGCTCTCTCTTCTCAAAAAGACGATAAGATTGCCTCTGCAATTAAGAAGGTCACAAATTTGCTTGGCGGTAAGCAGCAGAGTGAAATACATGTTCTTGAAAATCATCTGAAGGAGCTCGAGAGTATAGTACAACAAATTATAAGAAAATCTGTCTAG 1899 0.3965 MAKKYQGKAIGIDLGTTNSCVAVWLDEHNRVEIIHNDQGSKTTPSFVAFTDYQRLIGDAAKNQTASNPQNTVFDAKRLIGRKFSDSVVQNDMMVWPFKVVSGVDDKPMISVKYKGQEKHLCAEEISSMILTRMREIAETFLESPVTNAVITVPAYFNDYQRKATIDAGAIAGLNVMKIINEPTAAAIAYGLDKRINCVGRKRNIFIFDLGGGTFDVSIVTIKDEVIHSKKTIKDTVLDLLKNKKDKVIQVKATAGNTHLGGEDFDSRMVNYFAREFKKKTNVDITRNPRALRRLRRECERAKRTLSFALVANIEIDSLFEDIDFFSSITRSMFEEINMDLFNECLKIVETCLIDAKMDKSDIHHVVLVGGSSRIPKLQQLLQEFFAGKDLCKSINPDEAVAYGAAVQAALLSGGFKNVPNLVIQDVTPLSLGISLKGHIMGVAIPRNTSIPIKITKRCETVYDNLDAVGIEVYEGERARASDNNLLGSFVLSGLPRAPRGHPIDVCFDIDENGILTVSAYVKSTGSKNKITITNNKERLSSSQEIKEKIREAEKYRVEDEKFLRRAKLMNKLDDCVYKLRNALSSQKDDKIASAIKKVTNLLGGKQQSEIHVLENHLKELESIVQQIIRKSV* 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0411 632 ProSitePatterns Heat shock hsp70 proteins family signature 2. 206 219 IPR018181 -
Tpr3g0411 632 Gene3D - 10 409 - -
Tpr3g0411 632 Coils Coil 291 311 - -
Tpr3g0411 632 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Tpr3g0411 632 Gene3D Actin; Chain A, domain 4 260 343 - -
Tpr3g0411 632 SUPERFAMILY Actin-like ATPase domain 200 413 IPR043129 -
Tpr3g0411 632 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr3g0411 632 PRINTS 70kDa heat shock protein signature 38 50 - -
Tpr3g0411 632 PRINTS 70kDa heat shock protein signature 60 68 - -
Tpr3g0411 632 PRINTS 70kDa heat shock protein signature 148 168 - -
Tpr3g0411 632 PRINTS 70kDa heat shock protein signature 212 222 - -
Tpr3g0411 632 PRINTS 70kDa heat shock protein signature 362 378 - -
Tpr3g0411 632 PRINTS 70kDa heat shock protein signature 394 414 - -
Tpr3g0411 632 PRINTS 70kDa heat shock protein signature 420 439 - -
Tpr3g0411 632 PRINTS 70kDa heat shock protein signature 500 516 - -
Tpr3g0411 632 Gene3D - 73 128 - -
Tpr3g0411 632 Coils Coil 610 630 - -
Tpr3g0411 632 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr3g0411 632 ProSitePatterns Heat shock hsp70 proteins family signature 3. 365 379 IPR018181 -
Tpr3g0411 632 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 416 569 IPR029047 -
Tpr3g0411 632 Gene3D - 194 391 - -
Tpr3g0411 632 PANTHER HEAT SHOCK PROTEIN 70KDA 244 630 IPR013126 GO:0005524|GO:0140662
Tpr3g0411 632 PANTHER HEAT SHOCK PROTEIN 70KDA 4 237 IPR013126 GO:0005524|GO:0140662
Tpr3g0411 632 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 417 572 IPR029047 -
Tpr3g0411 632 Gene3D - 570 632 IPR029048 -
Tpr3g0411 632 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 237 - -
Tpr3g0411 632 PANTHER HEAT SHOCK 70 KDA PROTEIN 244 630 - -
Tpr3g0411 632 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 630 IPR029048 -
Tpr3g0411 632 Pfam Hsp70 protein 246 630 IPR013126 GO:0005524|GO:0140662
Tpr3g0411 632 Pfam Hsp70 protein 9 237 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0411 Tpr-Chr3 4349684 4351723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0411 1 630 Calmodulin-binding Proteins AT3G12580 61.957 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0411 K03283 - gmx:102667572 826.239