Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0407 ATGAGTGAAGGTGAGAATAGTGATATCACTCCTAAAAACGTACCATTAGATTCGGTTGCAAATTCTACCTCAAAGAAGCTTGCTAGACAACTCGATTTCAACGCTTTTGGTGGTGCCCCGGTAACTGCACCTTTGCCGGAACAGCAGCAACCACCGCCGACACTGCCTCCTCTTCCTGCAGCCAAATTGGGGAAACCAGAATCTCCAAAATCAAAATCAAGATCTAATTTTGAAACAAAAGATGCTACTCCAAAGAAGCAAAAGCAGTGCAACTGTAAACACTCAAGATGCTTAAAGTTGTATTGTGAATGTTTTGCATCCGGAATATATTGTGACGGTTGTAATTGCGTAAATTGTTTTAACAATGTTGACAATGAAGCGGCTAGACGAGAAGCTGTGGAAGCAACTTTAGAACGTAATCCAAATGCATTTAGGCCGAAAATAGCGAGTAGCCCTCATGGCAGGGAGGAAGTTTTAATATTGGGAAAGCACAATAAGGGGTGCCATTGTAAAAAATCTGGGTGCCTCAAGAAGTACTGTGAATGTTTCCAAGCCAACATTCTTTGTTCTGAAAATTGTAAATGCATGGATTGCAAAAACTTTGAAGGAAGTGAAGAGCGACAGGCTCTGTTCCATGGAGATCAAAACAACAATATGGCATATATTCAGCAGGCAGCCAATGCTGCCATCACTGGAGCTATTGGTTCCTCTGGTTATTCATCACCACCAGTATCGAGAAAAAGAAAAGGTTCGGAACTCTGGCCGTCCATCAAGGATCCATCTGTTAGCAAGCTGGGACAGCAGGCAAATCCTATCAGAGGTCCTGCAGCACCCTCCTCATCCATGTCTCCTGTCCCAGTTGCTCGTGTTGGACCTGCAACAGTCGGCCCTTCAAAATTTATGTACAGGTCTCTTTTAGCAGACATCATACAACCACAGCACCTGAAGGAGCTTTGCTCTATTCTTGTGCTAGTATCCGGACAAGCCACTAAAACACTTACAGAGCAGAAAAATTTAAAGGATAAGCATGCAGAAGATCAGACAGAAACTTCTCTTGCTTCTTCAAATCAAGAGCAATTACCAAATCAAAAGGAAGCTAATGTGGAGAAAGCTATGGCTGATGATTGTTCGAGTGCAACCCAAACTGATAAAACCAGTCCTGAAAATTCCAGTTCAGATGGTGCTGATGTTCCAAAAGGGAGGCCAATGTCTCCTGGAACTTTAGCATTGATGTGTGATGAGCAAGATACAATGTTCATGAATGCTGCCCCCTCTATTGGATCAATGGCTCATGCTTGCAACACATCTTCGCAATTGCCTTATGGACAAGGAGCGAAAGAGATCTATGCAGAGCAAGAAAGGATTGTATTGACGAAATTCAGAGATTTTCTTAATAGGGTTATCACTATGGGAGAAATAAATGAAACAAAGTGTTCTTCATTAGCAAGAAGTGAGTTAGAGATTCAAAAGGACCCTATCATCAATAGCACTGAAAGGGCCAGTACTGAGGCAGCGCATCAACAGGGAGTGGGAGCCACTAGTAATGGTGCTGCCAATGTTGTTGGCAACACCACCACTTCAACATCTTTGGTCCCTAGTAGTCTTGTTTCGGAAAAATGGGAAATTAAGCCGAAGGTTGAACAATAG 1647 0.4287 MSEGENSDITPKNVPLDSVANSTSKKLARQLDFNAFGGAPVTAPLPEQQQPPPTLPPLPAAKLGKPESPKSKSRSNFETKDATPKKQKQCNCKHSRCLKLYCECFASGIYCDGCNCVNCFNNVDNEAARREAVEATLERNPNAFRPKIASSPHGREEVLILGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDQNNNMAYIQQAANAAITGAIGSSGYSSPPVSRKRKGSELWPSIKDPSVSKLGQQANPIRGPAAPSSSMSPVPVARVGPATVGPSKFMYRSLLADIIQPQHLKELCSILVLVSGQATKTLTEQKNLKDKHAEDQTETSLASSNQEQLPNQKEANVEKAMADDCSSATQTDKTSPENSSSDGADVPKGRPMSPGTLALMCDEQDTMFMNAAPSIGSMAHACNTSSQLPYGQGAKEIYAEQERIVLTKFRDFLNRVITMGEINETKCSSLARSELEIQKDPIINSTERASTEAAHQQGVGATSNGAANVVGNTTTSTSLVPSSLVSEKWEIKPKVEQ* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0407 548 MobiDBLite consensus disorder prediction 261 277 - -
Tpr3g0407 548 MobiDBLite consensus disorder prediction 38 80 - -
Tpr3g0407 548 MobiDBLite consensus disorder prediction 336 403 - -
Tpr3g0407 548 MobiDBLite consensus disorder prediction 498 519 - -
Tpr3g0407 548 PANTHER TESMIN/TSO1-RELATED 56 514 IPR028307 -
Tpr3g0407 548 MobiDBLite consensus disorder prediction 374 393 - -
Tpr3g0407 548 ProSiteProfiles CRC domain profile. 86 203 IPR005172 -
Tpr3g0407 548 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 56 514 - -
Tpr3g0407 548 MobiDBLite consensus disorder prediction 45 63 - -
Tpr3g0407 548 MobiDBLite consensus disorder prediction 349 364 - -
Tpr3g0407 548 MobiDBLite consensus disorder prediction 1 21 - -
Tpr3g0407 548 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 166 200 IPR005172 -
Tpr3g0407 548 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 87 122 IPR005172 -
Tpr3g0407 548 MobiDBLite consensus disorder prediction 240 283 - -
Tpr3g0407 548 SMART CXC_2 85 125 IPR033467 -
Tpr3g0407 548 SMART CXC_2 163 204 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0407 Tpr-Chr3 4323182 4329716 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0407 66 499 CPP Transcription Factor Family AT4G29000 61.656 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Tpr3g0407 TCR 2.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0407 - - gmx:100786353 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0407 3 4323182 4329716 Tpr3g0407 3 4323182 4329716 ECH