Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0385 ATGACTGATCTTAACTCAAGTATTGGCAATAACAGCTCCTTGCTCAAAATACCGACCATCAAGTATAACAAGCTCTTCATCAATGGAGATTTTGTCGATTCTCTATCAGGAGCAACATTTGAGACAATAGACCCAAGAACAGAAGAGGTGATTGCAAGAATCAGTGAAGGAGCTAAGGAAGACATTGACATTGCAGTTAAAGCAGCACGCGAGGCATTTGACTCCAGTCCATGGCCTCGAATGTCTGGTGAGGCAAGGGGGAAAATAATGATGAAATTTGCAGAACTAATTGATGAAAACATAGAAGAATTAGCAGCATTAGATGCAATTGATGCTGGAAAGTTGTACTATATTGCCAAGGTTATGGAAATTCCTGGAGCAATAAGTATACTACGTTACTATGCAGGTGCCGCTGATAAAATTCATGGCGAGGTATTAAAAAGTCATGGCCAATTCCACGCGTACACATTAATGGAACCGATTGGCGTTGTGGGACATATAATTCCATGGAATGCTCCCAGTTCAATTTTCTTCACCAAAGTTGCTCCTTCTTTAGCTGTTGGATGCACTATGGTGCTCAAACCTGCTGAACAAACACCTCTCTCTGCTTTGTTTTATGCTCATCTAGCTAAACTGGCTGGAATCCCAAATGGAGTGTTGAACGTAGTACCCGGATTTGGACCAACTGCTGGTGCTGCAATTAGCTCACACATGGACATAGACGCGGTTAGCTTTACTGGTTCAGTTGAAGTAGGCCGTGAAATAATGCAAGCTGCAGCTAAGAGTAATTTAAAACATGTTTCACTTGAATTAGGAGGCAAGTCACCTCTTATTATTTTCGATGATGCTGACGTAGACAAAGCTGCTGACCTTGCTCTTCTCGGTATCCTAGCTAACAAGGGAGAAGTTTGTTGTGCAAGTTCTCGTGTGTTTGTTCAAGAAGGGATCTACGATCAAGTTGAGAAGAAGTTGGTGGAGAAGGCAAAAGCTTGGATCGTCGGCGATCCTTTTGATCCTAAAAGTCAGCAAGGACCTCAGGCTGATAGGAACCAATTAGAAAAAATTCTATCCTACATTGAGCATGGAAAGAGAGAAGGAGCTACACTCTTGACTGGAGGTAGAAGATTGGGCAGTGAAGGCTACTACATCGAACCTACAATTTTCTCCAATGTAAAGGAGGACATGCTTATAGCAACAGATGAAATATTTGGCCCTGTAATGGCACTGATGAAGTTTAAGACTATTGAGGAAGCCATTAAGAGTGCTAATAATACCAGATATGGGCTAGCAGCAGGCATTGTGACCAAGGACATGGATATTGCAAACACCGTTTCAAGGTCCATTCGTGCAGGCATTATTTGGATCAACTGTTATTTAGCCTTGGGAAGTGATTTTCCTTTTGGAGGATATAAAATGAGTGGAATTGGAAGAGATTCGGGATTAGAAGCTCTTCATAAGTACTTACAAGTTAAATCTGTGGTAACACCTATTTACAATTCTCCCTGGCTTTGA 1512 0.4167 MTDLNSSIGNNSSLLKIPTIKYNKLFINGDFVDSLSGATFETIDPRTEEVIARISEGAKEDIDIAVKAAREAFDSSPWPRMSGEARGKIMMKFAELIDENIEELAALDAIDAGKLYYIAKVMEIPGAISILRYYAGAADKIHGEVLKSHGQFHAYTLMEPIGVVGHIIPWNAPSSIFFTKVAPSLAVGCTMVLKPAEQTPLSALFYAHLAKLAGIPNGVLNVVPGFGPTAGAAISSHMDIDAVSFTGSVEVGREIMQAAAKSNLKHVSLELGGKSPLIIFDDADVDKAADLALLGILANKGEVCCASSRVFVQEGIYDQVEKKLVEKAKAWIVGDPFDPKSQQGPQADRNQLEKILSYIEHGKREGATLLTGGRRLGSEGYYIEPTIFSNVKEDMLIATDEIFGPVMALMKFKTIEEAIKSANNTRYGLAAGIVTKDMDIANTVSRSIRAGIIWINCYLALGSDFPFGGYKMSGIGRDSGLEALHKYLQVKSVVTPIYNSPWL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0385 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 297 308 IPR016160 GO:0016491
Tpr3g0385 503 SUPERFAMILY ALDH-like 15 499 IPR016161 GO:0016491
Tpr3g0385 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 27 491 IPR016162 GO:0016491
Tpr3g0385 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 269 276 IPR029510 GO:0016491
Tpr3g0385 503 PANTHER CYTOSOLIC ALDEHYDE DEHYDROGENASE RF2C 5 503 - -
Tpr3g0385 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 273 462 IPR016163 GO:0016620
Tpr3g0385 503 Pfam Aldehyde dehydrogenase family 32 493 IPR015590 GO:0016491
Tpr3g0385 503 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 5 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0385 Tpr-Chr3 4141578 4146811 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0385 10 503 Aldehyde Dehydrogenase Gene Family AT3G24503 69.495 0.0 724
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0385 K12355 - gmx:100779993 817.379
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0385 3 4141578 4146811 Tpr3g0385 3 4141578 4146811 ECH
Tpr3g0385 3 4141578 4146811 Tpr5g2937 5 52391388 52395161 ECH
Tpr3g0385 3 4141578 4146811 Tpr5g0029 5 394158 404628 PCT