Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0378 ATGAAATTCATAGATTTTCTCTTTGCAGTGAAACCTCTTTTTCCAATATTAATAGCTATTGTTTTAGCTGCTTATTTGGTTATCAAAATTCATGGCAATAGATTAGTTGACAAGAAAAGAAAATATCACCCTATTGCTGGCACAGTCTTGCATCAACTGTTCCACTTTCACAGGTTGCTAGAGTACATGACTGACCTTACAAATAAGAGAAAAACTTACAGGTTGCTTAGCTTCACTAGAAGTGAAGTGTACACTGCAAACCCTGCTAATATTGAGCATATGCTAGTCACAAACTTCTCAAACTATGGCAAGGGTTGGTATCACCACAGTGTCTTGGAAGATCTACTGGGAGATGGTATATTCACAGTGGACGGAGAGCAGTGGCGACATCAGAGAAAATCAGCAAGCTATCAATTCTCAACTAAGTTATTGAGAGAATTCAGCAGCTCAGTGTTCAAATCCAACGCAGTAAAACTTGCAGGGATAGTGTCTGAAGCTGCAATCTCAAACAATACTATTGAACTGCAGGACCTGTTCATGAAATCAACTCTAGATTCTGTATTCAAGGTTATTCTTGGTGTAGAATTGGACACAATGTGTGGAACCTATAGAGAAGGTACACAATTTTCCACTGCTTTTGATGAAGCAAGTGAAGCTATCATGTTTCGGTATGTTAACTTTCTCTGGAAGGTTCAGCGGTTCTTGAACATTGGATCGGAAGCAGTACTAAAAAAAAGCCTAAGAGTGATCGACGACTACGTATACAAAGTAATCACAAGCAAGATTGAGCAATCTCAAAAGCCACAAGATAACTCTCTTGGGCTGAAAGGAGACATTTTGTCAAGGTTTCTAGAATTGAATGAGACAGATTCAAAGTACCTTAAAGACATTATTTTGAGTTTTATCATTGCAGGGAAAGATACAACAGCAATCACTCTTTCTTGGTTTATTTACCAACTCTGCAAGCATCCTCATGTGCAGGAAAAGATTGCGCAAGAGATTAGGGACGTAACAAAATTAGAAAATGGTTTAACCATTGATGAACTTGCAGCTAAAGTAACTGAAGAAAGCATGAAAAAGATGCAGTATCTGCATGCAGCTTTGACCGAAACTATCAGGCTCCATCCAGCAGTTCCAGTGGAAAGTAGGTATTGTTTTTCGGATGACACGCTACCAGATGGATATAGTGTGAGGAAAGGTGATCTTGTTTCATTCCAACCATATGTGATGGGAAGGATGAAATTCTTGTGGGGTGAAGATGCTGAGCAATTCAGGCCAGAGAGATGGCTTGATGAAAATGGAAATTTTAAGAAAGAAAGCTCTTTTAAGTTCACTGCCTTCCAGGGGGGTCCAAGAATTTGCCTTGGCAAAGACTTTGCATACAGACAGATGAAGATATATTCTGCAATTCTGTTAGGTAGCCACGGCTTCAAACTAGCAGACCAAAATAAATTGGTGAAATACAGAATCATGCTCACTCTACAAATTGATGGTGGCCTACATGTCTATGCTTTTCAGAGAAATAAATAA 1530 0.3889 MKFIDFLFAVKPLFPILIAIVLAAYLVIKIHGNRLVDKKRKYHPIAGTVLHQLFHFHRLLEYMTDLTNKRKTYRLLSFTRSEVYTANPANIEHMLVTNFSNYGKGWYHHSVLEDLLGDGIFTVDGEQWRHQRKSASYQFSTKLLREFSSSVFKSNAVKLAGIVSEAAISNNTIELQDLFMKSTLDSVFKVILGVELDTMCGTYREGTQFSTAFDEASEAIMFRYVNFLWKVQRFLNIGSEAVLKKSLRVIDDYVYKVITSKIEQSQKPQDNSLGLKGDILSRFLELNETDSKYLKDIILSFIIAGKDTTAITLSWFIYQLCKHPHVQEKIAQEIRDVTKLENGLTIDELAAKVTEESMKKMQYLHAALTETIRLHPAVPVESRYCFSDDTLPDGYSVRKGDLVSFQPYVMGRMKFLWGEDAEQFRPERWLDENGNFKKESSFKFTAFQGGPRICLGKDFAYRQMKIYSAILLGSHGFKLADQNKLVKYRIMLTLQIDGGLHVYAFQRNK* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0378 509 SUPERFAMILY Cytochrome P450 41 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PANTHER CYTOCHROME P450 27 507 - -
Tpr3g0378 509 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PANTHER - 27 507 - -
Tpr3g0378 509 Gene3D Cytochrome P450 39 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 Pfam Cytochrome P450 43 483 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PRINTS E-class P450 group IV signature 295 321 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PRINTS E-class P450 group IV signature 361 377 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PRINTS E-class P450 group IV signature 395 409 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PRINTS E-class P450 group IV signature 438 454 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Tpr3g0378 509 PRINTS E-class P450 group IV signature 454 472 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0378 Tpr-Chr3 4067035 4069563 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0378 16 508 Cytochrome P450 AT2G45510 51.703 2.00e-178 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0378 - - pvu:PHAVU_007G063800g 787.719