Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0364 ATGGTTAAGCGAAATTCTACTAAAGAAAAAGAAAAAGTTCCAAACACTAAGATTGTTCATATCAATGGAACAGTGGAAAAAGTTTATCTGAAAAACCATGGAAAGAAGACTTTCACTAGTGAATATAAAGGCGTTCGCCGTAGGTCATGGGGAACATTTGCTGCTGAAATTCATGACCCATTCACCAAAAAAAGACTTTGGCTTGGAAGTTTTGAAAGAGAAGAATTAGCTGCTGTGGCATATAGTCAAAAGTTTGATGAGTTTCAAAGAAAGAAAGCTGAATTTGCATCAAGGGAGGATATGGATCTTAATCAACCATGTAATGAGCATCATTATAACTATGATGAACCTCCCTCCGATGATGATAACTTTGGTGGTAATTCAAATCAAATGAATTTAGGTGTTCAAGGCATGCAAGAGATTCAACCTTTAATTCATTAG 441 0.3537 MVKRNSTKEKEKVPNTKIVHINGTVEKVYLKNHGKKTFTSEYKGVRRRSWGTFAAEIHDPFTKKRLWLGSFEREELAAVAYSQKFDEFQRKKAEFASREDMDLNQPCNEHHYNYDEPPSDDDNFGGNSNQMNLGVQGMQEIQPLIH* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0364 146 Gene3D AP2/ERF domain 41 99 IPR036955 GO:0003700|GO:0006355
Tpr3g0364 146 CDD AP2 40 81 IPR001471 GO:0003700|GO:0006355
Tpr3g0364 146 ProSiteProfiles AP2/ERF domain profile. 41 106 IPR001471 GO:0003700|GO:0006355
Tpr3g0364 146 SMART rav1_2 41 102 IPR001471 GO:0003700|GO:0006355
Tpr3g0364 146 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 10 102 - -
Tpr3g0364 146 Pfam AP2 domain 41 81 IPR001471 GO:0003700|GO:0006355
Tpr3g0364 146 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Tpr3g0364 146 PRINTS Ethylene responsive element binding protein signature 64 80 IPR001471 GO:0003700|GO:0006355
Tpr3g0364 146 SUPERFAMILY DNA-binding domain 40 89 IPR016177 GO:0003677
Tpr3g0364 146 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF120-RELATED 10 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0364 Tpr-Chr3 3905304 3905744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0364 31 107 AP2-EREBP Transcription Factor Family AT1G49120 48.718 3.18e-17 74.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Tpr3g0364 AP2 2.1e-05 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0364 - K09286 cam:101510667 100.523