Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0344 ATGGCTGCTAAACGATTTTTATTTGATTCTATTCAAGACAATAAAGACAAACCAAATGACAATAAACGCATGAGAACTACCTCAAGATCTTCTTTTGCTTCGGTAATAGGAGAAGTAGTTATGGTGAAAAACATGCAAAATCTTTTCTCTGGCTTGGAACCTTTACTTAGAAGAGTGGTGAACGAAGAGGTGGAACGAGCGATGAGACAATGTTATCCACCGCGATCAATAACAAAGTCATCTTCATTGAGACTCAAAGGAGTTGAAGAACCATCAAGTTTTGAATTCATGTTCAATAAGAAACTTTCACTTCCAATATTCACAGGTAGTAAAATACTAGATATGGATGGAAACTCAATCAATGTGATTCTTGTTGACAAAAGCAATGGCCAAATTGTTCCTACAAGTTTACCTCATCCAATCAAGATTGAAATTGTAGTTCTTGATGGAGATTTTCCTCCTGGTGAAAAGGAATCATCATGGACAAGTGAAGAATTCAATAGTAATATTGTGAAAGAGAGAACTGGAAAGAGACCATTGCTTACAGGAGAATTGAATCTTACTATGAGAGATGGAATTGCACCTATTGGAGATATTGAGTTCACCGATAATTCTAGCTGGATTCGTAGCAGAAAGTTTAGAGTTGCTGTTAGAATTGCACCTGGGACTAATCAAAGTGTCCGAATTCGTGAAGGCATGACTGAACCTTTTGTTGTTAAGGATCACCGTGGTGAATTGTACAAGAAACACCACCCACCAAATCTAAATGATGAAGTTTGGCGCTTAGAGAAGATTGGAAAAGATGGAGCTTTTCACAAAAAATTGACTAAAGAAGGAATCACCACAGTGCAAGAATTTCTCAAATTATCTGTTGTTGACCCTCTTAGGCTAAGAAAGATTTTAGGCATGGGGATGTCAGAGAAAATGTGGGATGTGACAATTAGGCATGCCAAAACTTGTTTGATGGGAAACAAACTATATGTCTACCGTGGGCCTCAAGTTACCATATATCTCAACGCCATATGCCAAATGGTTAAAGCTTATGTCGACGGTCAAATTATTCCCAACCGAGACATTAACAACATGAATAAGGGATACATAGAAAAATTGGTGAGAGAAGCACATGCTAGATGGAATGATTTGGAGGAAATTGATGAAGTTTTGAATGACAATGTTGCTTTGTTAACTCAAGGTGAGACAGTGGAGCAATTTCAAAATAATATTCATCAAGCACCAGTTATAACATATGATCAGAATGAATTTTTTGGTGATAAATGTATAGATGGTGGCAACTATGTAGCAAGTCATAATAATAATGCACAAATAGGTTGCATTCAGTGGTCACCACCACATACCACATCACAATTCATGAATGGCATATTATCTTATAGCTTCTCAGATTTACAATCAGAAGGTGCTGATATAATGCCTTTAAGGTGGCATTAG 1446 0.3686 MAAKRFLFDSIQDNKDKPNDNKRMRTTSRSSFASVIGEVVMVKNMQNLFSGLEPLLRRVVNEEVERAMRQCYPPRSITKSSSLRLKGVEEPSSFEFMFNKKLSLPIFTGSKILDMDGNSINVILVDKSNGQIVPTSLPHPIKIEIVVLDGDFPPGEKESSWTSEEFNSNIVKERTGKRPLLTGELNLTMRDGIAPIGDIEFTDNSSWIRSRKFRVAVRIAPGTNQSVRIREGMTEPFVVKDHRGELYKKHHPPNLNDEVWRLEKIGKDGAFHKKLTKEGITTVQEFLKLSVVDPLRLRKILGMGMSEKMWDVTIRHAKTCLMGNKLYVYRGPQVTIYLNAICQMVKAYVDGQIIPNRDINNMNKGYIEKLVREAHARWNDLEEIDEVLNDNVALLTQGETVEQFQNNIHQAPVITYDQNEFFGDKCIDGGNYVASHNNNAQIGCIQWSPPHTTSQFMNGILSYSFSDLQSEGADIMPLRWH* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0344 481 PANTHER OS02G0177800 PROTEIN 1 477 IPR012416 GO:0005516
Tpr3g0344 481 Pfam Calmodulin binding protein central domain 255 320 IPR046830 -
Tpr3g0344 481 PANTHER PROTEIN, PUTATIVE-RELATED 1 477 - -
Tpr3g0344 481 Pfam Calmodulin binding protein C-terminal domain 325 384 IPR046829 -
Tpr3g0344 481 Pfam Calmodulin binding protein-like N-terminal domain 95 242 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0344 Tpr-Chr3 3726524 3728941 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0344 14 385 Calmodulin-binding Proteins AT5G57580 49.072 3.27e-117 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0344 - - gmx:100788183 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0344 3 3726524 3728941 Tpr3g0344 3 3726524 3728941 ECH