Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0340 ATGAGAACCCAACGCTCTCACCATTTCCTTCTATTATCAATCCTGTTCTTCGCATCAACATTCTCATTTCTCCGATTAGCAACCGCCACCGGAGCAGATCCTCCAACCACCGGCAACAACGACGACACCGAATACATCCGTTCAAGTTGCAACACAACACTATACCCTGACATATGCTACACTTCTCTCTCTCGTTACGCCAATGCAGTTCAACAAAATCCAGGCCAACTCGCTCGCATCGCCATAGCAGTAAGCTTCTCCAAGGTTCACCGTACCGCATCATATCTCTCAAATCTCACTCGCGTCGCTGATTATAGCGGTAACTCACGCGCCGCACTCGCTCTTCGTGACTGTTTCTCAAATCTAGATGACGCCGTTGATGAAATCCGTGGCTCGATTAAACAGATGCGTCAGTTAGGAGCCGCCGGAAGTGGAACCAATTCGTTTCTTTTTCAGATGAGTAACGTTCAGACGTGGATGAGTGCGGCGCTTACCGATGAAGAAACGTGTACGGATGGATTTCAAGATGTAGAGGATTGTCCGATGAAATCGGATGTAGAGAAACGTGTGACGAAGGTGAAGAAGTTCACGAGTAATGCTTTGGCACTTGTTAATGGTTACGCTAAACAAGGAATGCCGTGA 642 0.4766 MRTQRSHHFLLLSILFFASTFSFLRLATATGADPPTTGNNDDTEYIRSSCNTTLYPDICYTSLSRYANAVQQNPGQLARIAIAVSFSKVHRTASYLSNLTRVADYSGNSRAALALRDCFSNLDDAVDEIRGSIKQMRQLGAAGSGTNSFLFQMSNVQTWMSAALTDEETCTDGFQDVEDCPMKSDVEKRVTKVKKFTSNALALVNGYAKQGMP* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0340 213 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 210 - -
Tpr3g0340 213 Pfam Plant invertase/pectin methylesterase inhibitor 45 203 IPR006501 GO:0004857
Tpr3g0340 213 Gene3D Invertase/pectin methylesterase inhibitor family protein 41 207 IPR035513 -
Tpr3g0340 213 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 205 IPR035513 -
Tpr3g0340 213 SMART PMEI_2 41 203 IPR006501 GO:0004857
Tpr3g0340 213 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 12 210 - -
Tpr3g0340 213 CDD PMEI-like_3 48 209 - -
Tpr3g0340 213 TIGRFAM PME_inhib: pectinesterase inhibitor domain 13 207 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0340 Tpr-Chr3 3673351 3674445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0340 10 213 Carbohydrate Esterase AT5G53370 26.923 1.11e-14 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0340 - - cam:101503417 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0340 3 3673351 3674445 Tpr3g0340 3 3673351 3674445 ECH