Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0302 ATGGCACAACAATTTTCAACCCATATTAGGGTTCTCGTGGTTGATCATGATATCAATCTTCTCAATGCTATTGAGAAAGTATGCTATAAATTCAATTACACAGTCAAGACATGCTCCAAAGTTTCGGATGCTTTATATCTTTTGATGGAAAAAAATAATAGTTTTGACATGGTACTAATTGAAGCCAAAATGCCTGATATGAATTCATATGAATTTTTGCGACATGTTACACAACAAATCAACATTCCTGTTCTTATGATGTGTGTTGATGGCTCAAGAAGTGTTGTGATGAAGGCTATTAACGATGGAGCTTGTGATTATTGGATCAAACCTTTGACCGAGGATCTAATTATGAACATGTGGCAACATGTTGCAAGGAAAATTTGGAAAGAAAATAAAAACCTAGAATTAATGAGTGAAAAATTGGAGGTTGAAGTCGGTATGAAAAAAGGGGAGAGATATGATTTAAAATTGTCGTTAAATGATCCAAAGATAGAAGGAGTGATCAACACTAATGTGAAAGAAGAGAATTTTGAACAGAATAATGACAAACCTGAATCATCAGTAAAGAAGACACGTGTTACATGGTCATTAGAGTTGCATAAAAAATTTGTTAGTATTGTAAAGGAACTGAACGTTGATAAGGCAGGACCCAAAAAAATTCTTGCAAGAATGAATGAGCCTGGATTGACAAGAGAGCATGTAGCTAGTCACTTACAGAAATATAGACTATATTTGAAGAGAGGAGAGACTAAGAAACAGAACAAAACTGCCGAAGCTACTACTGAATCCAAGATTTCAAATGGATCTTCAGAATTTGATTTTCAAGCTTACGATGCTTCTACTGATCATCATGTTGTTCCCAACAATTTCATACCAACAAATTTTCCTCACCAGCCCAATAATTTTCCTCCTGAACCTATAGTTAATGCAGTTCCAGTTAATGTTTATCAAGCTGATTCTGAGGAAGAAACAAGTTCATCAACATCTATTAACCAGCATCAGAATTGCAATGGATTTGGGACTAATTCTATTATTAATCCAACATTTATAAATACTCTTAATGCACGATTTCCAAACGCGCAAGTTCGAAACATTTTCTTAGCCTGGCATCATCCCTCACCAAATTCCAATGACTCAACAACCTCTTCCAATGATCTTTGA 1164 0.3479 MAQQFSTHIRVLVVDHDINLLNAIEKVCYKFNYTVKTCSKVSDALYLLMEKNNSFDMVLIEAKMPDMNSYEFLRHVTQQINIPVLMMCVDGSRSVVMKAINDGACDYWIKPLTEDLIMNMWQHVARKIWKENKNLELMSEKLEVEVGMKKGERYDLKLSLNDPKIEGVINTNVKEENFEQNNDKPESSVKKTRVTWSLELHKKFVSIVKELNVDKAGPKKILARMNEPGLTREHVASHLQKYRLYLKRGETKKQNKTAEATTESKISNGSSEFDFQAYDASTDHHVVPNNFIPTNFPHQPNNFPPEPIVNAVPVNVYQADSEEETSSSTSINQHQNCNGFGTNSIINPTFINTLNARFPNAQVRNIFLAWHHPSPNSNDSTTSSNDL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0302 387 CDD REC_typeB_ARR-like 11 125 - -
Tpr3g0302 387 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 191 244 IPR006447 GO:0003677
Tpr3g0302 387 Gene3D - 188 248 - -
Tpr3g0302 387 SUPERFAMILY Homeodomain-like 189 248 IPR009057 -
Tpr3g0302 387 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 5 325 - -
Tpr3g0302 387 SMART REC_2 9 121 IPR001789 GO:0000160
Tpr3g0302 387 ProSiteProfiles Response regulatory domain profile. 10 125 IPR001789 GO:0000160
Tpr3g0302 387 SUPERFAMILY CheY-like 8 139 IPR011006 -
Tpr3g0302 387 Pfam Myb-like DNA-binding domain 193 243 IPR001005 -
Tpr3g0302 387 Pfam Response regulator receiver domain 11 120 IPR001789 GO:0000160
Tpr3g0302 387 Gene3D - 2 131 - -
Tpr3g0302 387 PANTHER TWO-COMPONENT RESPONSE REGULATOR 5 325 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0302 Tpr-Chr3 3331397 3333117 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0302 44 248 Response Regulator Gene Family AT3G16857 42.222 4.78e-47 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Tpr3g0302 Response_reg 1.3e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0302 - K14491 cam:101491966 278.87