Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0301 ATGGCACTTCCTCAACAATTTTCAACTCATATTAGGGTTCTTGTGATTGATCATGATATCAATCTTCTCAATGCTATTGAGAAAGTATGCTATAAATTCAATTACAAAGTTAAGTCATGCTCCAAGGTTTCTGATGCTTTCAATATTTTGTTGGGAAAAAAAGATATTTTTGATTTGGTGCTAATTGAAGCTAAAATGAATGATATGGATTCATATGGATTTTTGCAACATGTTACCCAACAAATCAACATCCCTGTTATTATGATGTGTGATGATGGCTCAAGAAGTGCTGTGATGAAGGCTATTGATGATGGAGCTTGTGACTATTGGATCAAACCTTTAACTGAGAGTCTAATTATGAACATGTGGCAACATGTTGCAAGGAAACTTTGGAAGGAAAATAAAAACATAGAATTAATGAGTGAAGGAGTGATCAACACTAGTGTGAAACAAGAGAGTGTTGAAAAGAATAATGACAAACCTGAATCATCAACAAATAAGACACGTGTTAAATGGTCACCTGAGATGAATATAAAGTTTATTAGAACTGTGGTGGAACTCAACATTGATAAGGCAACACCCAAAAAGATTCTTGAAAGGATGAATGTGCCTGGATTGACAAGAGAGCATGTAGCTAGTAAATTACAGAAATACAGACTTGAATTGAAGAGTGGAGGGACAAAGAAACAAAAAAAACAGAACAGAATTGCAGAAGCTACTACAGAATCAAAGATTTCAAATGAATCTTCCGAGTTTGATTTTCAAGCTTATGATGCTTCTACTCTTCATGTTGTTCCCAATAATTTCATGCCAACAAATTTTCCTCAGCAGCCCAACAATTTTTCTCACCAGCCTAACAATGTTCCAATTAAGTTTTATCAAACTGACTCTGAGGAAGAAACAAGTTCGCCAGCTTCTATAAACCAGCAGCAGGATTGCAATGGATTTGGGACTAACTCTATTATTAATCCAGCATTTATAAGTACTCTTAATGCACAATTTCCAAACGCACAAGTTCGAAATGTTTACTTAGCCCAACATTATCCCTCACCAAATTCCAATGATTCAACCTCTACATATGATCTTTGA 1089 0.3489 MALPQQFSTHIRVLVIDHDINLLNAIEKVCYKFNYKVKSCSKVSDAFNILLGKKDIFDLVLIEAKMNDMDSYGFLQHVTQQINIPVIMMCDDGSRSAVMKAIDDGACDYWIKPLTESLIMNMWQHVARKLWKENKNIELMSEGVINTSVKQESVEKNNDKPESSTNKTRVKWSPEMNIKFIRTVVELNIDKATPKKILERMNVPGLTREHVASKLQKYRLELKSGGTKKQKKQNRIAEATTESKISNESSEFDFQAYDASTLHVVPNNFMPTNFPQQPNNFSHQPNNVPIKFYQTDSEEETSSPASINQQQDCNGFGTNSIINPAFISTLNAQFPNAQVRNVYLAQHYPSPNSNDSTSTYDL* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0301 362 MobiDBLite consensus disorder prediction 223 238 - -
Tpr3g0301 362 Pfam Response regulator receiver domain 13 121 IPR001789 GO:0000160
Tpr3g0301 362 MobiDBLite consensus disorder prediction 223 245 - -
Tpr3g0301 362 Gene3D - 163 224 - -
Tpr3g0301 362 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 7 311 - -
Tpr3g0301 362 SMART REC_2 11 123 IPR001789 GO:0000160
Tpr3g0301 362 SUPERFAMILY CheY-like 10 142 IPR011006 -
Tpr3g0301 362 CDD REC_typeB_ARR-like 13 127 - -
Tpr3g0301 362 Gene3D - 5 134 - -
Tpr3g0301 362 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 311 IPR045279 GO:0009736
Tpr3g0301 362 MobiDBLite consensus disorder prediction 150 169 - -
Tpr3g0301 362 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 167 221 IPR006447 GO:0003677
Tpr3g0301 362 ProSiteProfiles Response regulatory domain profile. 12 127 IPR001789 GO:0000160
Tpr3g0301 362 SUPERFAMILY Homeodomain-like 165 224 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0301 Tpr-Chr3 3326875 3329316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0301 46 234 Response Regulator Gene Family AT3G16857 37.339 9.39e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr3g0301 Response_reg 5.3e-11 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0301 - K14491 aprc:113870027 228.409