Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0300 ATGACACTTTCTATTGAGGAAGAGTTGCTTTCTCTTGAACAATTTACATCCAATGTTAGGGTTCTTGCTATTGATCATGATATCAATATTCTCAATACTATTGAGAAAATGTGCTCTCAATTCGATTATCCAGTTAAGACATGCACCAAAGTTTCTGAAGCCTTAAATCTTTTGAACAAAAAAAAAGATTATTTTGATGTGGTAGTGATTGAAGCTCAAATGCCCGACACGGATTCTTATGATTTTTTGAAACATGTTATACAACAATTTAATATCCCTGTCATTATGATGTGTGCTAATGATTCAAGAAGTGTTGTGATGAAGGCTGTTATAAACGGGGCTTGTGATTCTTGGATCAAACCATTGAGTGAGGATCAAATCAAGTTCATATGGAAACATGTTGCAATGAAAGTTTTTAATGAAACAAAAAAGCTAGAAATTAATGAAAAATTAGGGGTTGAAGTAAAGAAAGAATTAGAGAAAGATGATTCAAAATTGCCATTAATTGGTGCAACAAGAGAAAGAGAGGTCGAAAATAGTGACACAAAAGAGAGTGTTGTTGAAGAGGGCAAAGATAAACATGAATCTCCACCTAAGAAAGCACGAGTTATATGGTCACGAGAATTGCATAAAAAATTTGTCAATGCTCTAATGGATCTTAACATTGATAATGCAGTACCAAGAAAAATTCTAGAAAAGATGAAAGTGCCTGAATTGACAAGAGAGCAAGTTGCTAGTCATCTACAGATGCTTGTTGCATGA 762 0.336 MTLSIEEELLSLEQFTSNVRVLAIDHDINILNTIEKMCSQFDYPVKTCTKVSEALNLLNKKKDYFDVVVIEAQMPDTDSYDFLKHVIQQFNIPVIMMCANDSRSVVMKAVINGACDSWIKPLSEDQIKFIWKHVAMKVFNETKKLEINEKLGVEVKKELEKDDSKLPLIGATREREVENSDTKESVVEEGKDKHESPPKKARVIWSRELHKKFVNALMDLNIDNAVPRKILEKMKVPELTREQVASHLQMLVA* 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0300 253 CDD REC_typeB_ARR-like 21 135 - -
Tpr3g0300 253 SUPERFAMILY CheY-like 17 135 IPR011006 -
Tpr3g0300 253 Pfam Response regulator receiver domain 21 127 IPR001789 GO:0000160
Tpr3g0300 253 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 200 251 IPR006447 GO:0003677
Tpr3g0300 253 SMART REC_2 19 131 IPR001789 GO:0000160
Tpr3g0300 253 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 249 IPR045279 GO:0009736
Tpr3g0300 253 Gene3D - 198 252 - -
Tpr3g0300 253 SUPERFAMILY Homeodomain-like 198 250 IPR009057 -
Tpr3g0300 253 Gene3D - 11 140 - -
Tpr3g0300 253 MobiDBLite consensus disorder prediction 177 199 - -
Tpr3g0300 253 ProSiteProfiles Response regulatory domain profile. 20 135 IPR001789 GO:0000160
Tpr3g0300 253 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR14 16 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0300 Tpr-Chr3 3321640 3323249 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0300 15 237 Response Regulator Gene Family AT4G16110 38.525 3.23e-44 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tpr3g0300 Response_reg 7e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0300 - K14491 cam:101491966 213.772