Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0292 ATGCATTATTATGATTATATACCTTACATTGCTCAAGCCATGGTAGATTGCTATGGCTTAAGTTGGTTAGAGATCTCCAACTGTGAATCCCTCTCGAACCTTCCAATTGACCTTTTTAAGTTGAAATTTCTAAGAAGACTTTACCTCAGTGGTTGCTTGAATTTAGAGAAGTTCCCTGAAATCGAGGAGAATATGAAAAGTTTGACTGTGCTCACGTTAGACAGAACTGCAATCAAGGAACTACCTTCATCCTTGCACCATTTGGTCAGCCTCGAAGAATTGAGCTTGTACAATTGCCAGAACCTCGAGTCTATTCCACCTTCGATTGGAAGTCTAAGAAAACTCAACAAGTTAAGCATTATGTACTGTGAATCACTTGAAACTTTTCCTAGCAGTATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGCTGCTCAATGCTGAAGATCTTCTCAGAGATCTTGGAGCCTGCTGAAACTTTTGTTCACATTAACTTAACAAAAACAGCGATTAAGGAACTGCCTTCATCCTTGGAGTATTTGGTTGGACTTCAAACCTTGTGCCTGAAGTTATGCAGTGATCTGGTGTCACTTCCAAACAGCGTTGTTAATCTAAACTATCTATCTGAGCTTGATTGTTCTGGCTGTTGCAGTTTAACAGAAATCCCAAGTAATATATAA 684 0.3845 MHYYDYIPYIAQAMVDCYGLSWLEISNCESLSNLPIDLFKLKFLRRLYLSGCLNLEKFPEIEENMKSLTVLTLDRTAIKELPSSLHHLVSLEELSLYNCQNLESIPPSIGSLRKLNKLSIMYCESLETFPSSIFKLKLTKLDLHGCSMLKIFSEILEPAETFVHINLTKTAIKELPSSLEYLVGLQTLCLKLCSDLVSLPNSVVNLNYLSELDCSGCCSLTEIPSNI* 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0292 227 Gene3D Ribonuclease Inhibitor 162 227 IPR032675 -
Tpr3g0292 227 SUPERFAMILY L domain-like 9 225 - -
Tpr3g0292 227 Gene3D Ribonuclease Inhibitor 6 161 IPR032675 -
Tpr3g0292 227 PANTHER LEUCINE-RICH REPEAT-CONTAINING 19 112 - -
Tpr3g0292 227 PANTHER LEUCINE-RICH REPEAT-CONTAINING 154 223 - -
Tpr3g0292 227 PANTHER LEUCINE-RICH REPEAT-CONTAINING 105 204 - -
Tpr3g0292 227 PANTHER TMV RESISTANCE PROTEIN N-LIKE 105 204 - -
Tpr3g0292 227 PANTHER TMV RESISTANCE PROTEIN N-LIKE 154 223 - -
Tpr3g0292 227 PANTHER TMV RESISTANCE PROTEIN N-LIKE 19 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0292 Tpr-Chr3 3273287 3274717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0292 85 226 WRKY Transcription Factor Family AT4G12020 36.620 1.64e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0292 - - mtr:MTR_8g090280 290.426