Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0291 ATGTTGGGATCAACTTCTTCTTGTACTGCAATTTCCATGTCTTGTTCTCCAACTACGAAGCATGATGTGTTCCTCAGCTTCAGAGGAGAGGATACACGTGACAACTTCATCAGTCATCTTTATGCTGAACTGGGCAGGAAAAAGGTTGAAACCTTCATTGATTACAGACTCATCAGAGGCGATGAGATTTCTCCGGCACTCTACAAAGCAATTGAAGAATCAATGATTTATGTTGTCATTTTGTCCGAGAACTACGCTTCTTCCACATGGTGTTTGGATGAACTCACAAAGATACTTGAATGCAGAGAGAAATATGGAAGGGATGTCATACCTGTATTCTATAAGGTGGATCCATCAAATGTTAGGCATCAGAGAGAGAGTTATGCAGAAGCTTTTGTTAAGCATCAACGTCGATTTAAGGACGATCAACTGGATTCATGGAAGAAAGCTCTAAACCAAGTAGCCGGACTCTCTGGCTGGGATTCACAAGTAACCAGACCAGAACACAAACTTATTGAAGATATTGTGAAAGATATTTTAAGAAAATTGCAATTGAATTGTTCTTTCGTAAGTGATTATCAAGGAATAATGGTTGGGATTGACAAACATATTGAACAAATACAATCATTGTTGCACGTCGACTCAAAGGAAGTTCGAATTGTAGGAATTTGGGGTATGGGAGGAATAGGAAAAACAACAATTGCTACTGCAATATATCAAAAACTGGCCACTCAATTCAGTTCCAGCAGCATCATCTTAAATGTCCAACAAGAAATGGAGAGATTTGGACTACACCATATACGAAGCAAATACATGTCAGAGCTTATAGGGGAAAACAACAGATTGTCTGGATTAAGTCTTTCTCTCCTTGTTCTTGATGATGTGAACAATTCGAGTCAGCTTAAAGATTTAATTGGAAGGCGTAGTAACTTTGGGCCAGGTAGTAGAATCATTGTGACTAGTAGAGACATGCAGGTATTAAAGAATGTTGATGCTGATGGAATATATGAAGTCAAGGAGATGAATTTTCATGAATCTCTACGACTGTTCTGTTTAAATGCCTTTAAACAAAACTATCCCGTAGATGATTATGCGGACTTATCAGAGAAGATATTAAATTACGCTAAAGGGGTTCCGTTAGCTCTTAAAGTTTTGGGATTTTTGCTGTGCGGTCGAACAAAGGAAGCATGGGAAAGTCAATTACAAAAGCTGGATAAGCTTCCCGAGAATGACATCTTCAAAGTGTTGAAATTAAGTTATGAAGGGCTTGACGAAGAACAGAAGGATATATTTCTTGACATGGCTTGTTTCTATAGAGGGCATTTGGAGAATGTTGTGGCACAAACTCTGGATAGTTGTGGTTTTTCTGCTCATATTGGAATGCATGTTCTCAAAGATAGGTGCCTTATTTCTATATCAGAAGGAAGAATTGTGATGCACGATCTAATACAAGAAATGGGACATGAAATTGTTCGTAAACAATGTGTCAATGATCCTGGAAAACGTAGTCGACTATGGAAGCCTGAGGAAATTTATCAAGTTTTCAAAAAGAACAAGGGGACGGATGCAATCCAGTGTATATTCCTGGAATTATGCATGATAGAAAAGATTCAACTACATGCTAAAACTTTCAGAAAAATGGATAATCTTAGAATGATGCAGTTCTATAATCCTCATGGTTGTTCAAAAGGCTCAAATGTGGTCCTTCCTGCATTTTTTAATAGTCTTCCGGATGATTTAAAATTTCTTCGTTGGGATGACTTTCCTAAAAAATCTTTGCCACTAGACTTTTGCCCCAAAAATCTAGTTAAACTTTATATGCCCGGTAGCCATCTTGAACTACTTTGGCAGCGAGATAAGGAATTACCAAATTTGAAAACACTTGACCTTCGTCGTTCTCTGAACCTGATTCAAATACCAGATCTCGCTCTATGCCCAAATATTGAAGAAGTGTTTCTTAGTCATTGCCCAAAGTTGGGTGAAGTTTATTCTTCTAGTTTCCTCTACAAGCTCAAATCTTTATGGTTTGATGGTTGTGTTAGCATTAGGAGTATACACATTCCTAGCAGTATTCTCCAGAGAACTTCTGGATTAATAGTGCTCAATGGTTGTCACAATCTTGAGATGTTTTCAGTCAGTAATGCAAAAATGGGGGTTCAGCTACATGGTTGTTCAACCAGTATGTTCAGAAACATTGTTCCTGTGGCAAAACAAAGTGGCAAGCGTTTAAGGTCCTTTTCTTCGAAATGCTCCCTCGAAGATAGTTTTGGGCATCATCTTAAACAAAATAAAGCCTCAGTTACTCTTGACCCCCTGGATTATGTTGAGTTAAACAAAGAACCAGAGGATAATATACAATTACTAAACTTAACATTGTTGAGAGAAGGTTCACCCTCATCATTTCCAAGTCTAAATGAGCTTTGTTGGTTAGATCTCTCCAACTGTGAATCCCTCTCGAGCCTTCCAATATGCCTTTTTAAGTTGAAATTTCTGAGAAGACTTTACCTCAGTTGTTGCTTGAATTTGGAGAAGTTTCCTGAAATCGAGGAGGCCATGGAAAGTTTAGTGGTGCTCATCTTAAACGAAACATCAATCATGGAACTACCTTCATCCTTGAACCGTTTGGTCAACCTTGAAGAGTTGAGCTTGTACAATTGCCAGAAGCTTGAGACTATTCCATTTTCCATTGGAAGTCTATGCAAACTCAACAAGTTAAACCTTACCTGTTGTGAATCACTTGAAACTTTTCCGGTCACCATTTTCAAATTGAAGTTGACAAAACTTGATTTGCATGGTTGCTCAATGCTGAAGACCTTTCCAGAAATCTTGGAGCCTGCAGAAACTTTCGTTCACATTAACTTAACGAAAACAGCAATTAAGGAACTGCCTTCTTCTTTGGATTATTTGGTTGGACTCCAAACCTTGTGCCTGAAGTTATGCACTGAGCTTGTGTCACTTCCAAACAGCATTGTTAATCTAAACCATCTATCTGAGCTTGATTGTTCTGGTTGTTGCAGTATTGTGAACCTTCCTGAGAGCATAGCTCATCTCTCAAGTTTGAAATCACTTAATTTAAGTGATTGCAATAGGCTTGAATGTATCCCACAACTTCCACCATCTTTAAACAAGTTGTTGGCATATGATTGCCCATTTGTTGGAAGAATGATTCCAAATTCAAGGTTGGAACTCCCATCAAATCCCAAAGAGGGCATATTTGAATTTCATTTCACCAATAGTCAAGAACTGGACGGAAGTGCTCATAGTAATATTGGAGCCGAAGCATGGCTTAGGATCACTGAAGTTGTATACCGGGATGTGTTCTTCTGTTTTCCTGGAAGTGCAGTTCCTCGTTGGTTCTCTTATCGTTCTGAAGGATGTTCAGTGTCTGTGAACAATGATTCTAAAAAATGGTGCAGTGATAATATCCTCATTGGTTTTGCTTTGTGTGTTGCTTTGGGATGTGTGGATATGGATGATACAATAACAAGTAGTTGTAGCTTTAGATACACATTAACATTTGAATATGATGGTTGCACGCACATTCTTGACAACAACAAAAATATACATAACAGCTTCTATTGGAAGGGTCGAGATAGGTTATTCGTCCAAGATCACACACTCATATGGACATATCACTTGGACTTTGCAACCATTGACAACAGGCTCTTTGATGCCCACAACTTCACTTTTGAGATCAGCAAACATCATCTCTCATATTCTAAATCAAGTGTCATGGTGAAAGAGTGTGGAATATGCCCTCTATTTGAAAATCTGATTTTAAAATAA 3786 0.3822 MLGSTSSCTAISMSCSPTTKHDVFLSFRGEDTRDNFISHLYAELGRKKVETFIDYRLIRGDEISPALYKAIEESMIYVVILSENYASSTWCLDELTKILECREKYGRDVIPVFYKVDPSNVRHQRESYAEAFVKHQRRFKDDQLDSWKKALNQVAGLSGWDSQVTRPEHKLIEDIVKDILRKLQLNCSFVSDYQGIMVGIDKHIEQIQSLLHVDSKEVRIVGIWGMGGIGKTTIATAIYQKLATQFSSSSIILNVQQEMERFGLHHIRSKYMSELIGENNRLSGLSLSLLVLDDVNNSSQLKDLIGRRSNFGPGSRIIVTSRDMQVLKNVDADGIYEVKEMNFHESLRLFCLNAFKQNYPVDDYADLSEKILNYAKGVPLALKVLGFLLCGRTKEAWESQLQKLDKLPENDIFKVLKLSYEGLDEEQKDIFLDMACFYRGHLENVVAQTLDSCGFSAHIGMHVLKDRCLISISEGRIVMHDLIQEMGHEIVRKQCVNDPGKRSRLWKPEEIYQVFKKNKGTDAIQCIFLELCMIEKIQLHAKTFRKMDNLRMMQFYNPHGCSKGSNVVLPAFFNSLPDDLKFLRWDDFPKKSLPLDFCPKNLVKLYMPGSHLELLWQRDKELPNLKTLDLRRSLNLIQIPDLALCPNIEEVFLSHCPKLGEVYSSSFLYKLKSLWFDGCVSIRSIHIPSSILQRTSGLIVLNGCHNLEMFSVSNAKMGVQLHGCSTSMFRNIVPVAKQSGKRLRSFSSKCSLEDSFGHHLKQNKASVTLDPLDYVELNKEPEDNIQLLNLTLLREGSPSSFPSLNELCWLDLSNCESLSSLPICLFKLKFLRRLYLSCCLNLEKFPEIEEAMESLVVLILNETSIMELPSSLNRLVNLEELSLYNCQKLETIPFSIGSLCKLNKLNLTCCESLETFPVTIFKLKLTKLDLHGCSMLKTFPEILEPAETFVHINLTKTAIKELPSSLDYLVGLQTLCLKLCTELVSLPNSIVNLNHLSELDCSGCCSIVNLPESIAHLSSLKSLNLSDCNRLECIPQLPPSLNKLLAYDCPFVGRMIPNSRLELPSNPKEGIFEFHFTNSQELDGSAHSNIGAEAWLRITEVVYRDVFFCFPGSAVPRWFSYRSEGCSVSVNNDSKKWCSDNILIGFALCVALGCVDMDDTITSSCSFRYTLTFEYDGCTHILDNNKNIHNSFYWKGRDRLFVQDHTLIWTYHLDFATIDNRLFDAHNFTFEISKHHLSYSKSSVMVKECGICPLFENLILK* 1262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0291 1261 Pfam NB-ARC domain 201 419 IPR002182 GO:0043531
Tpr3g0291 1261 Gene3D - 18 187 IPR035897 -
Tpr3g0291 1261 Gene3D Ribonuclease Inhibitor 755 923 IPR032675 -
Tpr3g0291 1261 PRINTS Disease resistance protein signature 220 235 - -
Tpr3g0291 1261 PRINTS Disease resistance protein signature 282 296 - -
Tpr3g0291 1261 PRINTS Disease resistance protein signature 375 389 - -
Tpr3g0291 1261 PRINTS Disease resistance protein signature 1015 1031 - -
Tpr3g0291 1261 Pfam C-JID domain 1110 1256 IPR045344 -
Tpr3g0291 1261 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 160 IPR035897 -
Tpr3g0291 1261 Gene3D - 341 424 IPR042197 -
Tpr3g0291 1261 Gene3D Ribonuclease Inhibitor 518 722 IPR032675 -
Tpr3g0291 1261 Gene3D Ribonuclease Inhibitor 924 1069 IPR032675 -
Tpr3g0291 1261 SMART till_3 20 157 IPR000157 GO:0007165
Tpr3g0291 1261 Gene3D - 188 336 IPR027417 -
Tpr3g0291 1261 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 791 IPR044974 GO:0006952
Tpr3g0291 1261 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 819 1158 IPR044974 GO:0006952
Tpr3g0291 1261 SUPERFAMILY RNI-like 528 714 - -
Tpr3g0291 1261 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 193 433 IPR027417 -
Tpr3g0291 1261 ProSiteProfiles Leucine-rich repeat profile. 1019 1041 IPR001611 GO:0005515
Tpr3g0291 1261 SUPERFAMILY L domain-like 479 1050 - -
Tpr3g0291 1261 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 819 1158 - -
Tpr3g0291 1261 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 14 791 - -
Tpr3g0291 1261 Pfam TIR domain 20 184 IPR000157 GO:0007165
Tpr3g0291 1261 ProSiteProfiles TIR domain profile. 19 183 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0291 Tpr-Chr3 3264781 3269717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0291 803 989 WRKY Transcription Factor Family AT4G12020 29.907 5.07e-12 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0291 - - ccaj:109803335 1384.01