Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0278 ATGGAACAAGTTCAGTGTTTCGGCCGTAAGAAGAATGCTGTTGCAGTAACACACTGCAAGAGAGGTCGCGGTCTGATCAAGATCAATGGAGTTCCAATCGAACTCATCGAGCCTGAGATTCTCCGATTCAAGGCATACGAACCAATCCTCCTTCTCGGAAGACACCGTTTCGCCGGCGTTGACATGAGGACTCGTGTGAAGGGAGGAGGTAAAACTTCTCAGATCTATGCCATCAGACAGAGTATCGCTAAGGCTTTGGTTGCTTACTACCAGAAATACGTTGATGAACAGAGTAAGAAGGAGATCAAGGATATTCTTGTTCGTTATGATCGTACTCTTCTTGTTGCTGATCCTAGACGCTGTGAGCCTAAGAAGTTTGGTGGTCGTGGTGCTCGTGCTAGGTTCCAGAAATCTTACCGTTAA 423 0.4657 MEQVQCFGRKKNAVAVTHCKRGRGLIKINGVPIELIEPEILRFKAYEPILLLGRHRFAGVDMRTRVKGGGKTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0278 140 Gene3D - 1 140 IPR014721 -
Tpr3g0278 140 PANTHER RIBOSOMAL PROTEIN S9 2 140 IPR000754 GO:0003735|GO:0005840|GO:0006412
Tpr3g0278 140 ProSitePatterns Ribosomal protein S9 signature. 68 86 IPR020574 GO:0003735|GO:0005840|GO:0006412
Tpr3g0278 140 PANTHER 30S RIBOSOMAL PROTEIN S9P 2 140 - -
Tpr3g0278 140 SUPERFAMILY Ribosomal protein S5 domain 2-like 3 140 IPR020568 -
Tpr3g0278 140 Pfam Ribosomal protein S9/S16 8 140 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0278 Tpr-Chr3 3168375 3169086 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0278 2 140 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 87.770 1.04e-89 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0278 K02960 - rcu:8288339 268.855