Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0269 ATGGGGAAGAAGAAGAAGAGAGTTGCTTCAAAGGTTTGGTGTTATTACTGCGATCGAGAATTCGACGATGAGAAGATCTTGGTTCAGCATCAGAAAGCTAAACACTTTAAGTGTCATGTTTGTCATAAGAAGCTTTCAACTGCTGGTGGCATGTCCATTCACGTTCTTCAGGTCCACAAGGAAAACGTCACCAAGGTGCCAAATGCGAAACCTGGAAGAGAGAGTACAGATATTGAAATATATGGAATGCAAGGGATTCCACCAGATGTCTTGGCTGCTCATTATGGAGATGAAGATGACGACGTTCCATCAAAGACAGCCAAGGTGGATATCCCATCAACCCCATTTGTAGGTGGAATGGCGCCACCACCTATGGGTGCCGGATATCCTCCGCGACCAACCTTGGGCCCAATTCGACCAGTTTATAATCCTGCTCTACCAGTACCTCCTAATGCCTGGGGAGTGGTTCCACCTCGACCGCCTCAGCCATGGTTTTCCCAGCCTCCAGCTGTTTCAATCCCCCCTTCTGTTCCATATGCACAGCAACCATTATTTCCTGTGCAGAATGTGAGGCCTCCACTGCCATCAACTAATTCTCCTGCACCACACAATCAGATTACTCCGCCTGGACTGCCTACATCCACAGCTTCTGTCCCAGTTTCACAACCTTTATTTCCTGTTGTTGGAAATAACCACACGACAACTCAAAGTTCACCATTTTCTACTACACCTCTGTCTTCAGGTGTTCCATCAATTACTCCCATGCTTTCTTCAAATGTCCCTTTTGACGCACATTTGGGCATCAACTCTTCCGTGACAAGTAGTTATCAAGCATTTGGGCTTCCAGGCGGGATAGCAAGTAACTCACATTCTTATGCTTCTGGCCCAAATACTGGTGGTCCTTCAATTGGACCTCCCCCAGTAATTTCAAACAAAGCTCCTGCTTCTCAGCCTGCCACTAATGAAGTCTACTTAGTTTGGGATGACGAGGCAATGTCCATGGAGGAAAGAAGAATGTCTTTAACAAAATATCAGGTGCATGATGAAAGTAGCCAGATGAGCTCCATTGATGCTGCCATAGATAAGAGGATACTTGAGAGCAGACTGGCTGGTCGTATGGCGTTTTAG 1128 0.4645 MGKKKKRVASKVWCYYCDREFDDEKILVQHQKAKHFKCHVCHKKLSTAGGMSIHVLQVHKENVTKVPNAKPGRESTDIEIYGMQGIPPDVLAAHYGDEDDDVPSKTAKVDIPSTPFVGGMAPPPMGAGYPPRPTLGPIRPVYNPALPVPPNAWGVVPPRPPQPWFSQPPAVSIPPSVPYAQQPLFPVQNVRPPLPSTNSPAPHNQITPPGLPTSTASVPVSQPLFPVVGNNHTTTQSSPFSTTPLSSGVPSITPMLSSNVPFDAHLGINSSVTSSYQAFGLPGGIASNSHSYASGPNTGGPSIGPPPVISNKAPASQPATNEVYLVWDDEAMSMEERRMSLTKYQVHDESSQMSSIDAAIDKRILESRLAGRMAF* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0269 375 MobiDBLite consensus disorder prediction 292 315 - -
Tpr3g0269 375 MobiDBLite consensus disorder prediction 99 122 - -
Tpr3g0269 375 ProSitePatterns Zinc finger C2H2 type domain signature. 14 35 IPR013087 -
Tpr3g0269 375 ProSiteProfiles Zinc finger BED-type profile. 7 66 IPR003656 GO:0003677
Tpr3g0269 375 SMART c2h2final6 36 59 IPR013087 -
Tpr3g0269 375 SMART c2h2final6 12 35 IPR013087 -
Tpr3g0269 375 ProSitePatterns Zinc finger C2H2 type domain signature. 38 59 IPR013087 -
Tpr3g0269 375 PANTHER BUB3-INTERACTING AND GLEBS MOTIF-CONTAINING PROTEIN ZNF207 1 375 - -
Tpr3g0269 375 PANTHER ZINC FINGER PROTEIN 207 1 375 - -
Tpr3g0269 375 Gene3D Classic Zinc Finger 2 66 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0269 1 355 C2H2 Transcription Factor Family AT1G30970 63.315 9.59e-140 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr3g0269 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0269 - - gmx:100819009 632.098