Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0242 ATGAAGAACATTCTTAAGAAGCTTCATATAATGTCTAATAATCAATCAGAAGATGCACAATCAGAAAGAAGCAACAAGTCAAATGATGGCTCATCTTCATCTCCTACTACCCGAAAGAAGCTTTCAAATTGGTTGCAATCGGTTTCTTCTAATAGGCAGAGTCCTAGCAGTCCTCCATCGCCACACCTGGCAAGAGGAGAAAGAGTAGAGCTATCTGATTCAGTGACTTTTGGTGGTGGTGGTGGTGGTGGTGGTTTGGATATGGTGGTGTGTGATTCAACCAAGCGTGATTCGGGGTCTAGCAGTTCAAGGGATCCTGAAGTGGAAGAAGAATATCAGATTCAGCTTGCTTTAGAGCTGAGTGCAAAGGAGGATCCTGAGGCTGTACAGATTGAAGCTGTTAAGCAGATCAGTTTGGGATCTTGTGACCCTGATAATACACCAGCTGAAGTTGTTGCATATAGATACTGGAATTACAATGCTCTTGGCTATGATGACAAGATCTCAGACGGTTTCTATGATCTGTATGGTGTCTTAACCGATTCAACCTCGACAAGAATGCCTTCTCTGGTAGATTTGCAAGGAACACCAACTGCAAATGATGTAAAATGGGAAGCAGTCTTGGTCAATAGGGTTGCCGATTCCAATTTGTTGAAACTTGAGCAAAAGGCCTTGGAGCTTGCAGTGGAATCAAGAGAAGATTTTGAAATAGTTGTAGATAGAAATTTGGTGCACAATCTGGCAATACTAGTGGCTGAATATATGGGTGGATCAGTTGAAGATCCTGAAAGCATGTCAAGAGCATGGAGGAGTCTTAGTTACAGTCTAAAAGCAACCCTTGGTAGCATGGTTTTGCCACTTGGATCATTGACCATTGGATTGGCTCGGCATCGTGCATTGTTATTTAAGGTATTAGCTGATAGTTTGGGCATCCCTTGTCGGTTGGTGAAAGGAATGCAATATACAGGTTCAGATGATGTGGCAATGAACTTTGTCAAGATTGACGAGGGCAGGGAGTACATTGTTGACCTCATGGCAGCTCCTGGAACTCTTATTCCATCTGATGCAACTGGTTCACATATTGAGTATGATGATTCTTCTTTTATAGCCAGTCCTTCATCAAGAGACCTTGATTCATCTAACATTGCATCGTTCAGCACCGGGGTTGGAAGTTCATCTGAAGAAACTTCAGAGTTTGCGAATTTTGATAAAGGAAATAGATACAAACATTTTGCCTATGCAGAGAAGGAATCGGATGTTAGTAGCCCCCCCACTGGCAAGGAAGAATCAAAGAAACCACTAAACGAATTCAAAAATATCCCTAACGTAGAAAAAATCAAGGCGAGGGAATCTGTTAGCAGACCTAATAATTATCCATATACGCACGGAAGATCTCCTTCTTGGACAGAAGGGATCAGTTCCCCGGCAGCACATCGAATGAAAGTCAAAGATGTTTCCCAATATATGATTGATGCTGCCAAGGAAAACCCTAACTTGGCTCAAAAACTTCATGATGTTTTACTCGAAAGTGGCGTTGTTGCTCCCCCAAACTTGTTTTCTGAAATTTATCATCAGCAGTCAGGTTCCCAAAATGAGGCCAATTCTCCAACTGAAGAAAAAGATGAATATAAACAGGGAAGTGCACAGAAAGAAGATACGGTTAGCGATAATCTAGGTCCTCGATTTTTGCCTCCGTTGCCTCCCCACCGGATGCATCCCAAAGCAACTCCTAGCAATCAGCTGGAGCATTCTAAGCCTGTAGAAGGTTTGGGAATTGGCCTTTCTCTTGATACACGAGAAGCTGCTGGACAGCACATACATTCCGAGGCAGAGGCAACACAAGTAAAGTATGGGAAAAATGTCCCGGTTGCTGCTGCTGCAGCGGCCGCAGCTGCTGTTGTTGCATCTTCAATGGTAGTTGCTGTGGCAAAGTCAAACACTGATTCAAATTTTGAGATTCCTGTAGCGGCAGCTGCTACAGCTACTGCTGCAGCTGTTGTAGCAACCACTGCTGCTGTCAATAAACAGTATGAGCAGGGGAGTCGAAGTGACGGAGATACTGATGGTTCTGGTAATGAGCCAAAAGGTAGCGGTGATGGAAAGTATAATGCTTTAGGAGCGAACTCAGAAGGCGAGCAAAAATCTGATAGATCAGTAGGCAATGATAGCACGAAATCTGATTCTGCACTAGATGATGTTGCCGAGTATGACATTCCATGGGAGGAAATCGCGATGGGTGAGCGTATCGGACTTGGATCATATGGAGAAGTGTACCGTGGTGAATGGCATGGAACTGAAGTTGCTGTAAAAAAGTTTCTACTTCAAGATATCTCTGGGGAATCACTTGAAGAATTCAAAAGTGAGGTCCAAATAATGAGAAGACTGAGGCATCCAAATGTTGTTCTCTTCATGGGGGCTATAACTCGACCACCAAATCTTTCAATCGTTACTGAATTTCTTCCTAGAGGGAGTCTGTATAGATTAATTCATCGACCTAACAATCAATTAGATGAGCGAAGGCGGTTGAGGATGGCCCTGGATACTGCTCGAGGAATGAACTATTTGCACAACAGCACTCCAGTTATAGTGCATCGTGATTTGAAGTCTCCAAACCTCCTCGTTGACAAAAATTGGGTTGTAAAGGTATGTGATTTCGGCTTGTCTCGAATGAAGTACAGTACGTTCCTTTCTTCTAGATCAACTGCGGGAACAGCTGAGTGGATGGCTCCAGAAGTGTTGAGAAATGAACTTTCAGATGAAAAGTGTGATGTTTTTAGCTACGGGGTCATATTGTGGGAGCTCTCTACTCTGCGACAACCCTGGGGCGGAATGAATCCCATGCAAGTTGTTGGTGCTGTCGGTTTCCAGCATCGTCGTCTGGACATTCCAGATGATGTGGACCCTACCATTGCAAATATTATCAGACAATGTTGGCAGACAGATCCAAAGTTGAGGCCCACTTTTGCTGAAATCATGGCATTACTGAAGCCATTGCAGAAGCCAATTACTAGTTCTCAAGCGCAGAGAGCAAGTGCTCACAACACATCATCGCGAGTTGCTGAAAATCCTGCAGAATAG 3078 0.4376 MKNILKKLHIMSNNQSEDAQSERSNKSNDGSSSSPTTRKKLSNWLQSVSSNRQSPSSPPSPHLARGERVELSDSVTFGGGGGGGGLDMVVCDSTKRDSGSSSSRDPEVEEEYQIQLALELSAKEDPEAVQIEAVKQISLGSCDPDNTPAEVVAYRYWNYNALGYDDKISDGFYDLYGVLTDSTSTRMPSLVDLQGTPTANDVKWEAVLVNRVADSNLLKLEQKALELAVESREDFEIVVDRNLVHNLAILVAEYMGGSVEDPESMSRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLADSLGIPCRLVKGMQYTGSDDVAMNFVKIDEGREYIVDLMAAPGTLIPSDATGSHIEYDDSSFIASPSSRDLDSSNIASFSTGVGSSSEETSEFANFDKGNRYKHFAYAEKESDVSSPPTGKEESKKPLNEFKNIPNVEKIKARESVSRPNNYPYTHGRSPSWTEGISSPAAHRMKVKDVSQYMIDAAKENPNLAQKLHDVLLESGVVAPPNLFSEIYHQQSGSQNEANSPTEEKDEYKQGSAQKEDTVSDNLGPRFLPPLPPHRMHPKATPSNQLEHSKPVEGLGIGLSLDTREAAGQHIHSEAEATQVKYGKNVPVAAAAAAAAAVVASSMVVAVAKSNTDSNFEIPVAAAATATAAAVVATTAAVNKQYEQGSRSDGDTDGSGNEPKGSGDGKYNALGANSEGEQKSDRSVGNDSTKSDSALDDVAEYDIPWEEIAMGERIGLGSYGEVYRGEWHGTEVAVKKFLLQDISGESLEEFKSEVQIMRRLRHPNVVLFMGAITRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDTARGMNYLHNSTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKYSTFLSSRSTAGTAEWMAPEVLRNELSDEKCDVFSYGVILWELSTLRQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPTIANIIRQCWQTDPKLRPTFAEIMALLKPLQKPITSSQAQRASAHNTSSRVAENPAE* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0242 1025 MobiDBLite consensus disorder prediction 414 435 - -
Tpr3g0242 1025 MobiDBLite consensus disorder prediction 535 549 - -
Tpr3g0242 1025 SMART serkin_6 743 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0242 1025 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 1013 - -
Tpr3g0242 1025 MobiDBLite consensus disorder prediction 447 472 - -
Tpr3g0242 1025 MobiDBLite consensus disorder prediction 525 559 - -
Tpr3g0242 1025 Gene3D Transferase(Phosphotransferase) domain 1 821 1024 - -
Tpr3g0242 1025 PRINTS Tyrosine kinase catalytic domain signature 817 830 IPR001245 GO:0004672|GO:0006468
Tpr3g0242 1025 PRINTS Tyrosine kinase catalytic domain signature 856 874 IPR001245 GO:0004672|GO:0006468
Tpr3g0242 1025 PRINTS Tyrosine kinase catalytic domain signature 903 913 IPR001245 GO:0004672|GO:0006468
Tpr3g0242 1025 PRINTS Tyrosine kinase catalytic domain signature 922 944 IPR001245 GO:0004672|GO:0006468
Tpr3g0242 1025 PRINTS Tyrosine kinase catalytic domain signature 966 988 IPR001245 GO:0004672|GO:0006468
Tpr3g0242 1025 ProSiteProfiles Protein kinase domain profile. 743 999 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0242 1025 ProSitePatterns Protein kinases ATP-binding region signature. 749 771 IPR017441 GO:0005524
Tpr3g0242 1025 MobiDBLite consensus disorder prediction 1 68 - -
Tpr3g0242 1025 MobiDBLite consensus disorder prediction 677 730 - -
Tpr3g0242 1025 Gene3D Phosphorylase Kinase; domain 1 736 820 - -
Tpr3g0242 1025 CDD STKc_MAP3K-like 749 995 - -
Tpr3g0242 1025 Pfam Protein tyrosine and serine/threonine kinase 744 994 IPR001245 GO:0004672|GO:0006468
Tpr3g0242 1025 SUPERFAMILY Protein kinase-like (PK-like) 731 994 IPR011009 -
Tpr3g0242 1025 MobiDBLite consensus disorder prediction 454 472 - -
Tpr3g0242 1025 MobiDBLite consensus disorder prediction 8 60 - -
Tpr3g0242 1025 MobiDBLite consensus disorder prediction 1004 1025 - -
Tpr3g0242 1025 PANTHER MAP KINASE KINASE KINASE-LIKE PROTEIN 1 1013 - -
Tpr3g0242 1025 Pfam Ethylene-responsive protein kinase Le-CTR1 149 352 - -
Tpr3g0242 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 862 874 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0242 Tpr-Chr3 2880807 2889565 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0242 1 1009 MAP Kinase Kinase Kinase AT1G73660 61.688 0.0 1126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Tpr3g0242 PK_Tyr_Ser-Thr 8.8e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0242 - - gmx:100778331 1576.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0242 3 2880807 2889565 Tpr3g0242 3 2880807 2889565 ECH