Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0234 ATGTGGATGGTTGGTTACAATGAAGGTAGTGACTTCAACATGTCTGATTATCCATTCAATGGAAGGAAACTCAGGCCCCTCATCCCAAGACCAGTCACTTCTCCTAACAACAACACTTCAACTACAACTCCTTCCTTAAACCGCATTCATGGCGGCGCAAATGATTTCTTTTCACAGTATCACAATCTTCAGGCAATATCAGTGGGAGGAGATCAGAGCAAGAGATCATCAGAGTTGAATAATAGTCAAGCAGCAGCAGCAGGAGGAGGAGGAGGAGGAGTTGTAGTGAGTTCAAGATGGAATCCAACACCAGAACAGTTAAGAGCACTTGAAGAGTTGTATAGAAGAGGAACAAGAACACCATCTGCTGAACAAATCCAACAAATCACAGCACAGCTTAGAAGGTTTGGAAAAATTGAAGGCAAGAATGTTTTCTATTGGTTTCAGAATCACAAAGCTAGAGAAAGGCAGAAAAGACGCCGTCAAATGGAATCAGCTGCTGCTGATCATCAGTTTGATGCTACTCTTGAAAAGAAAGACTTATTAGGCGCAAGTAGGACAGTGTTTGAAGTTGAACACACCAAAAACTGGCTACCCTCTTCAAATTCCAGTACTAGTACTCTTCCTCTTGCAGAGGAATCTGTTTCAATTCAAAGGGTAGCAGGAAAAGCAGATGAGTACACTAGAACAGATGGATGGGTCCAATTCGATGAGGCAGCAGAATTACAACAAAGAAGAAACTTTATGGAAAGGAATGCCACGTGGCATATGATGCAGTTAACTACTTGTCCTACCCTCATTAACACTACACAGCTAAATTCTTCTAATTACACCACCACCCCTACTACTACTACTACTACTACTACTACCACTACATCATCAACAACAACAGCTAGCATGGCCACCACTGCCACAGTAACAACTAGGCTTATGGACCCAAAACTCATGATCAAGACCCATCATGATCTCAGCTTATTCATTTCACCTCAAACACAAAATGCTTTTAATATCCATTTAAGCAACAATACTCATCATCACCTGCAGGATGATCATTCTTTGGAGTCTCATCATCAAACCCTTCAACTTTTCCCAATAAGGAATGGTGGATTATGCAGTGATGATAATAACAAAGAGACAGAAATATCAGCTTCAGCAATGAATGCACCCAACCAGTTCATTGAATTTCTTCCGTTGAAGAACTGA 1203 0.4115 MWMVGYNEGSDFNMSDYPFNGRKLRPLIPRPVTSPNNNTSTTTPSLNRIHGGANDFFSQYHNLQAISVGGDQSKRSSELNNSQAAAAGGGGGGVVVSSRWNPTPEQLRALEELYRRGTRTPSAEQIQQITAQLRRFGKIEGKNVFYWFQNHKARERQKRRRQMESAAADHQFDATLEKKDLLGASRTVFEVEHTKNWLPSSNSSTSTLPLAEESVSIQRVAGKADEYTRTDGWVQFDEAAELQQRRNFMERNATWHMMQLTTCPTLINTTQLNSSNYTTTPTTTTTTTTTTTSSTTTASMATTATVTTRLMDPKLMIKTHHDLSLFISPQTQNAFNIHLSNNTHHHLQDDHSLESHHQTLQLFPIRNGGLCSDDNNKETEISASAMNAPNQFIEFLPLKN* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0234 400 Pfam Homeodomain 98 157 IPR001356 GO:0003677
Tpr3g0234 400 Gene3D - 96 158 - -
Tpr3g0234 400 CDD homeodomain 99 159 IPR001356 GO:0003677
Tpr3g0234 400 ProSiteProfiles 'Homeobox' domain profile. 103 158 IPR001356 GO:0003677
Tpr3g0234 400 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 36 400 - -
Tpr3g0234 400 SMART HOX_1 95 162 IPR001356 GO:0003677
Tpr3g0234 400 MobiDBLite consensus disorder prediction 71 93 - -
Tpr3g0234 400 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 36 400 IPR044555 GO:0003700|GO:0099402
Tpr3g0234 400 SUPERFAMILY Homeodomain-like 98 164 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0234 Tpr-Chr3 2832396 2835856 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0234 1 400 Wox Gene Family AT3G18010 35.990 2.40e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tpr3g0234 Homeodomain 1.1e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0234 - - gmx:100777274 439.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr3g0234 3 2832396 2835856 Tpr3g0234 3 2832396 2835856 ECH