Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0232 ATGCAATCCAATCATATCACGGTAAGTATCCCCTCCGTCAAACCCACTCCCACCGGCGAATCCTCCTCCGTCAAACCCACTCTCCTCCTCCGTCAAACCCACTCCCACCGGCGAATCCACCTCGTCCTCCGTCGCACAACCACTCACCATGACGACAATCCAATCAGCTTAAATCGCAAAATCAGCTTAAATCGCAAAATCAGCTTAATCGGATTAGCGATACGAGAAACAAACAAACAAAAAATGGTAAAATCACCTGATCAATATGATAGATTTTCAAAGGACTTTTTAATGGGAGGTGCAGCAGCAATCATATCCAAGACTGCAGTGGCACCCATTGAGAGAGTCAAACTTTTATTACAAAACCAAACTGAAATGATTAAAAGAGGACACCTCAAAACACCATACCTGGGTCTCTCTAATACCTTTAAGAGGGTCTTTCGAGAAGAGGGTCTCATTGCCTTTTGGAGAGGTCATCAGGCCAATGTTATAAGATATTTCCCCACACAGGCTTTCAATTTTGCATTCAAAGGTTACTTCAAAACCATCTTTGGATATTCCAAAGACAAACACGGCTACTTTATGTGCTTTGCTGGAAATGTCGCTTCAGGCAGTGCTGCTGGAGCTACTACTTCACTGCTTTTGTACCATTTGGACTACGCACGTACTAGGTTGGCCACTGATCTTACTGCTCACCGTCACTTTAAAGGAGGACTAATTGACGTTTATCGTAAAACCTTATCCACAGATGGAATTGCCGGCTTGTACAGAGGATTTGGGGTTTCAATATTGGGGATCACCTTGTATCGAGGGATGTACTTTGGGATCTATGACACCATGAAGCCTATTGTTTTAGTTGGGCCTTTTGAGGGGAACTTCTTTGCTAGTTTCTTGTTAGGTTGGAGCATTACAACCGTATCCGGTGTCTGTGCATACCCTTTTGACACATTGCGCCGGCGTATGATGCTAACCTCCGGACACCAGAACAAGTATTATAGTGCAATGCATGCGTTCCGTGAGATTGTTGGACAAGAGGGTTTCTTAGCTCTATTTCGAGGAGTCACTGCAAATATGCTTCTTGGAATGGCAGGAGCTGGGGTGCTTGCTGGAATAAACTACTGCTGGATTATGTAA 1134 0.4436 MQSNHITVSIPSVKPTPTGESSSVKPTLLLRQTHSHRRIHLVLRRTTTHHDDNPISLNRKISLNRKISLIGLAIRETNKQKMVKSPDQYDRFSKDFLMGGAAAIISKTAVAPIERVKLLLQNQTEMIKRGHLKTPYLGLSNTFKRVFREEGLIAFWRGHQANVIRYFPTQAFNFAFKGYFKTIFGYSKDKHGYFMCFAGNVASGSAAGATTSLLLYHLDYARTRLATDLTAHRHFKGGLIDVYRKTLSTDGIAGLYRGFGVSILGITLYRGMYFGIYDTMKPIVLVGPFEGNFFASFLLGWSITTVSGVCAYPFDTLRRRMMLTSGHQNKYYSAMHAFREIVGQEGFLALFRGVTANMLLGMAGAGVLAGINYCWIM* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0232 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 195 283 IPR018108 -
Tpr3g0232 377 SUPERFAMILY Mitochondrial carrier 90 367 IPR023395 -
Tpr3g0232 377 MobiDBLite consensus disorder prediction 1 25 - -
Tpr3g0232 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 291 377 IPR018108 -
Tpr3g0232 377 PANTHER ADP,ATP CARRIER PROTEIN ER-ANT1 88 371 - -
Tpr3g0232 377 Gene3D Mitochondrial carrier domain 93 375 IPR023395 -
Tpr3g0232 377 PRINTS Adenine nucleotide translocator signature 92 104 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g0232 377 PRINTS Adenine nucleotide translocator signature 136 157 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g0232 377 PRINTS Adenine nucleotide translocator signature 169 181 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g0232 377 PRINTS Adenine nucleotide translocator signature 195 208 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g0232 377 PRINTS Adenine nucleotide translocator signature 296 312 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g0232 377 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 88 371 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr3g0232 377 ProSiteProfiles Solute carrier (Solcar) repeat profile. 90 183 IPR018108 -
Tpr3g0232 377 Pfam Mitochondrial carrier protein 292 368 IPR018108 -
Tpr3g0232 377 Pfam Mitochondrial carrier protein 91 185 IPR018108 -
Tpr3g0232 377 Pfam Mitochondrial carrier protein 197 283 IPR018108 -
Tpr3g0232 377 PRINTS Mitochondrial carrier protein signature 95 108 IPR002067 GO:0055085
Tpr3g0232 377 PRINTS Mitochondrial carrier protein signature 108 122 IPR002067 GO:0055085
Tpr3g0232 377 PRINTS Mitochondrial carrier protein signature 158 178 IPR002067 GO:0055085
Tpr3g0232 377 PRINTS Mitochondrial carrier protein signature 210 228 IPR002067 GO:0055085
Tpr3g0232 377 PRINTS Mitochondrial carrier protein signature 256 274 IPR002067 GO:0055085
Tpr3g0232 377 PRINTS Mitochondrial carrier protein signature 300 322 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0232 Tpr-Chr3 2821874 2827738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0232 90 372 Antiporters AT5G17400 75.000 2.63e-148 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0232 K05863 - gmx:100798418 462.611