Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0230 ATGGCGCATCTAAGCGAACCGGCGAAGCTAAGGTGGGGAGAATTGGAGGAAGACGACGGTGAGGATCTTGATTTCCTTTTACCGCCACGTCAGGTGATTGGTCCTGATGAAAATGGAATCAAAAGGGTTATTGAATACAAGTTCGATGATGACGGTAATAAGGTTAAGATCACAACAACCACTCGCACCCGCAAACTCGCCAACGCTCGTGTCAGCAAACGCGCCATCGAACGCCGTTCCTGGCCTAAATTCGGCGACGCCGTTCAAGAAGATGTCGGTGCACGCCTCACTATGGTCTCAACTGAAGAGATCCTTCTCGAACGCCCCAAAGCTATTGGTTCCAACAAGGAGGATTCAAGCAATATCGACCCACTGGCTCATCAAAAAGGTGCCGTTCTTATGGTATGCAGGACTTGTGGTAAGAAGGGTGACCATTGGACTTCAAGGTGTCCCTATAAGGATCTTGCACAACCTGCTGAGGGTTTTGTTGATAAACCTCCAGCAGCAGATGGTGCTGCTGCGGCTGCTGCCGGGGGTAAGGGTGCATATGTACCTCCTAGCCTAAGAGCTGGTGCGGAGAGGACTACTGGTTCCGACATGAGGCGAAGGAATGATGAGAATTCTGTTCGGGTAACCAACCTCTCAGAAGACACAAGGGAACCTGATTTGCTTGAGCTGTTCCGCCCTTTTGGTACTGTCAGCAGGGTCTATGTTGCTATTGATCAAAAGACTGGCATGAGTAGGGGATTCGGCTTTGTCAACTTTGTAAGCAGGGAAGATGCTCAGAGGGCTATTAACAAACTCAATGGATATGGCTACGACAATCTCATCCTGAGAGTTGAATGGGCCACCCCAAGAACAACCTAA 867 0.4971 MAHLSEPAKLRWGELEEDDGEDLDFLLPPRQVIGPDENGIKRVIEYKFDDDGNKVKITTTTRTRKLANARVSKRAIERRSWPKFGDAVQEDVGARLTMVSTEEILLERPKAIGSNKEDSSNIDPLAHQKGAVLMVCRTCGKKGDHWTSRCPYKDLAQPAEGFVDKPPAADGAAAAAAGGKGAYVPPSLRAGAERTTGSDMRRRNDENSVRVTNLSEDTREPDLLELFRPFGTVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINKLNGYGYDNLILRVEWATPRTT* 289
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0230 288 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 207 285 IPR000504 GO:0003723
Tpr3g0230 288 Pfam Eukaryotic translation initiation factor 3 subunit G 31 155 IPR024675 -
Tpr3g0230 288 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 288 - -
Tpr3g0230 288 SUPERFAMILY RNA-binding domain, RBD 196 287 IPR035979 GO:0003676
Tpr3g0230 288 SMART rrm1_1 208 281 IPR000504 GO:0003723
Tpr3g0230 288 CDD RRM_eIF3G_like 208 283 IPR034240 -
Tpr3g0230 288 PIRSF Transl_init_eIF-3_RNA-bind 1 288 IPR017334 GO:0003743|GO:0005737|GO:0005852
Tpr3g0230 288 Gene3D - 179 288 IPR012677 -
Tpr3g0230 288 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 209 275 IPR000504 GO:0003723
Tpr3g0230 288 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 7 288 - -
Tpr3g0230 288 CDD eIF3G 38 154 IPR024675 -
Tpr3g0230 288 Hamap Eukaryotic translation initiation factor 3 subunit G [EIF3G]. 9 287 IPR017334 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr3g0230 Tpr-Chr3 2811140 2812629 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0230 8 288 Eukaryotic Initiation Factors Gene Family AT3G11400 68.153 6.70e-150 421
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0230 K03248 - gmx:100818725 496.123