Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0228 ATGGACGGCCTTCTCGGACTTCTAAGGATTCACATCAAGCGTGGCGTCAACCTTGCTGTTCGTGATGTCAATACAAGCGATCCATATGTGGTGGTTAAGATGGGAAGCCAGAAACTCAAGACTCGTGTCATTAGAAAGGATATCAATCCTGAATGGAATGAAGACCTTACACTCTCAGTAACAGAACCCGTTCTTCCATTCATGCTGACTGTGTATGATCATGACACATTTACCGCAGATGACAAAATGGGAGATGCTGAATTCGACCTCACACCATATGTAGAGGCCTTAAAGATGAACATAGAAGACATCCCCAACGGTACTATAATCACCAGAATACAACCGTGCAGGACTAACTGCTTAGCAGAGGAGAGTTGCATCACTTACACCGATGGCAAAATTATCCAAGATGCTATTCTTAGATTGCGACACGTTGAATGTGGGGAAGTTGAAATTCAATTGGAATGGATCAATCTTCCCGGTACTAAGGGTTTCTAA 498 0.4337 MDGLLGLLRIHIKRGVNLAVRDVNTSDPYVVVKMGSQKLKTRVIRKDINPEWNEDLTLSVTEPVLPFMLTVYDHDTFTADDKMGDAEFDLTPYVEALKMNIEDIPNGTIITRIQPCRTNCLAEESCITYTDGKIIQDAILRLRHVECGEVEIQLEWINLPGTKGF* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0228 165 CDD C2_ArfGAP 5 148 - -
Tpr3g0228 165 Pfam C2 domain 6 92 IPR000008 -
Tpr3g0228 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4-LIKE 1 164 - -
Tpr3g0228 165 Gene3D C2 domain 5 163 IPR035892 -
Tpr3g0228 165 SMART C2_3c 7 102 IPR000008 -
Tpr3g0228 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 164 IPR044562 -
Tpr3g0228 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 100 IPR035892 -
Tpr3g0228 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0228 Tpr-Chr3 2803277 2803941 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0228 38 165 C2H2 Transcription Factor Family AT1G70790 57.692 5.19e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0228 - - gmx:100799469 283.878