Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0223 ATGTCTTCTGCTGTTTTAGAGCACTTGTTGGATGTGGATGAACAGCAGCAGGAGCAACACAAATTCAAGATTAAAAATCTGAGAAAAGAATCCGATGATGGGAAAATTCACATACTGAAAGGAATCACCGTTGACATCCCAAAGGGTGTGATTGTTGGGATCATAGGCCCTAGTGGTAGCGGCAAGTCAACTCTCTTGAGGGCTTTGAATCGCCTCTGGGAGCCACCTTCCTCCTCCATATTCCTCGATGCCCAAGATATCTGCCACCTTGACGTCCTTTCCCTCCGCCGCAAGGTTGCAATGCTCTTTCAGCTCCCTGCTCTCTTTGAAGGGACAGTTGCCGAGAATGTGAGGTATGGTCCACAACTTAGAGGAATAAAGTTAACAGATGATGAGGTGCGCAAGTTGCTCATAATGGCAGACCTTGATGCTGCTTCTTTCATGGATAAGTCTGGTTCTGACCTCTCTGTGGGTCAGGCTCAAAGAGTTGCACTTGCTAGAACTCTAGCTAACTCACCTGAGGTTTTGCTGCTGGATGAGCCTACTAGTGCATTAGATCCAATATCCACAGAAAACATTGAAGGTGCCTTGATGAAGTTGAACAAGAATCAGGGTATGACACTCATCATGGTTTCCCATAGCATCAAACAAATCCAGAGGATGGCTGACGTTGTGTGTTTGCTTGTTGATGGTGAAATTGTTGAAGTTCTTAAGCCTAATCAACTCTCTCAAGCTAAGCATCCCATGGCAAGGAGGTTTCTTGAACTCAGTTCTTAA 777 0.4543 MSSAVLEHLLDVDEQQQEQHKFKIKNLRKESDDGKIHILKGITVDIPKGVIVGIIGPSGSGKSTLLRALNRLWEPPSSSIFLDAQDICHLDVLSLRRKVAMLFQLPALFEGTVAENVRYGPQLRGIKLTDDEVRKLLIMADLDAASFMDKSGSDLSVGQAQRVALARTLANSPEVLLLDEPTSALDPISTENIEGALMKLNKNQGMTLIMVSHSIKQIQRMADVVCLLVDGEIVEVLKPNQLSQAKHPMARRFLELSS* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0223 258 ProSitePatterns ABC transporters family signature. 155 169 IPR017871 GO:0005524
Tpr3g0223 258 Pfam ABC transporter 39 183 IPR003439 GO:0005524
Tpr3g0223 258 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 8 258 - -
Tpr3g0223 258 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 22 255 IPR003439 GO:0005524
Tpr3g0223 258 Gene3D - 9 257 IPR027417 -
Tpr3g0223 258 PANTHER ABC TRANSPORTER I FAMILY MEMBER 17 8 258 IPR005670 GO:0005315|GO:0016020|GO:0035435
Tpr3g0223 258 SMART AAA_5 48 239 IPR003593 -
Tpr3g0223 258 CDD ABC_PstB_phosphate_transporter 22 242 IPR005670 GO:0005315|GO:0016020|GO:0035435
Tpr3g0223 258 Coils Coil 10 30 - -
Tpr3g0223 258 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 23 246 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0223 Tpr-Chr3 2775098 2776412 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0223 36 242 Calmodulin-binding Proteins AT2G36910 32.877 1.19e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0223 K02068 - gmx:100791365 374.015