Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0211 ATGGCTAAGAGATCAGATTTTGCACAGAAGCTTCTCGATGATCTGCGCCTAAGGAAAGAACGAATGGCTGCTACTACGTCACATTCTCACAACTCAAACCAATCCCACCATTTGCCTATAGATGCATATGCATACACCAAGCAAACCTACAGAGGGTCGACAAATACAAGAGCAAATGAAATTGTTAGTTCCAGAAATAGGGAGATGGTAAATATGTCTAGCAGAAAGCCGAGATCTGTAAAGAGCTGGGGAAACTTGTCAAATCAGATTATTCCATACGGGAAAGCCTTTGAGCATAATGGAGGGAAACTAAGAAGAGCCGATTTGTCTTTCACCAATTCAATTTTGGGTTTCCTTCACCAAATTCAGAGGGGAACAATGGATAGAGGAGGCAACTTGGAAAGGCAACTAGCTTCAACTAGCCAAACCCTCTCTCGTGTGCGGATAAATGATATATCAAAAGGTGCACACAAACTAAACCACATATTGAGAGCTTGCTTCTCCAATGGTGTTAACATGGATACATATTCATTAAATTTTGCAAAGGAACTATTACAAGGAGCTATTGATTTGGAAGAATCCCTCAGGATGCTAGTAGACCTGCAGAAAAGTTCAGAGTTTATGATTACCTCGCAAGCGCAGAACAAGAATCGAATCACGCTATTGGAAGAGAAGGAGGAGGAGGATAATGAAGTGGGTGAGAGGAGAATGGAGAAAATGCAACTGGCACATCCAACTTTCTCGTTTGACAACAAGATGCAGAGACCAATTACCATCACTAACTCTAAGGAAGCCAGAAAGATAAAAGATTCTCAGCAGAAACGAATATCAACTAACACTGATGGAACTGCTGACATTTCAAACCAGACGGTCGGCAAGGGAAGGATTCCAAACATAATAGCCAAACTAATGGGGCTGGAAAACCATCCCGATAAGGACTCGGGTAATAGTAATATTGCATCATCCAAGCACTCTGCCAAAGGAAGCAGCAGCACTGCACTGAAGAGCAAACAAATAGACAATTTGATCAAAAACCAAAAAGTGGCTGTTGGATCCTTCAAAAACCTGATGTTTGGTGGTCCAGATACAAATTTGGTCCTCGAAAACCAAAAGGCTACCTATTATTCTGAGTCTGAGGTGGCTGGAATAAAAGCATTGAAGGGCTTTGACAAGGCCAACATCATCAACGGTTCTGCTTGTCAAAATTATGTTGAGGTGATGATGGGAAGGAAACAGGATCACCCACATAACAGTGGCACGTTGAAGGGAAGAAGCACCGATGGCAATGATGTGGGTCAAAATCTAAATAATTTGCAAGAAAGAAGATCCCAAGTTAAACCTGCCATTCAAATTGCAAAAGAAGAACATACAGTTACAAACAAGCACATGCAGATGAACAATGAAAAGAAGTCACGGGATCATCTCGTAGTTCAAAAGTCAATACTCTCCACAGGTGGAGGGAGTAAAATGAGACCCAAGAATTCACCAAAACAATCCACCAATAATGTTCAAAAGAAGAAAAAGAAATCATCCATAAACCAACCCACACCATCCAAGAAATCAAGTGATGATCATGATCTAGTCGTATCCAATGAGAAAGTAAAAGAAATTATTAATAGGAAGAAGTCCTCCCCAAGATATCAAGAATTTGAACGAGCTAACGGGAGACAAACACTCAAGGATCATAAACTCGCGACCAGCAACAAAATAAAGCCTGAAAAGATTGAACAAATTTTGAGTAGAAATAGACAGGAAGCTTGTGATAGAGTATCTGGCCAACTCAATGTCTTAAACGGAGCAGAGCAAAAAAGGTTTAGCATGTTCGTTGAACAGGACCTGCTTCCTCCTACTACATTATACAATTCTAGCGGTGGTGGAGATTTGCAAGAACCGGACAAGGATTTGAAATATCAAGCTGTGCAACAGATAGCAATCAATTTGCAAGATCAAGTTGTTCCTGAGGCACCACATGAAGGATTCAAGACTAGTGAAGTTGCATACCATAAAAGTAAAACAAACGGAGTTCTGGAAGACAGAATGGGTCTGAAACTACAAGATCAAAACATAAGCATCCAACAACCACTAACAGAAAGTGAAAACTGCCTCAAGTGGAATTTGGTCATGAGTCAATTATTCGTCAACACCGCAGAAGCACTTTTCAGACTAAACATCCCGTTTGGTATTCTTCAAGGTGGTTGTCAAGACAGTCAAGACCAAAGTAGCAAACTCATATTAGATTGCGGCTATGAAGTGATGAAAAGAAAGGGGATACGGCAGGAACTCAAAGTTCATACTTGTTCAAAAATATCATCAATCACTAGTACTTTTAACTTAATAAGATCCCTAGATGACTTGGTTAGGAAGTTGAATGAGGACATGGAGAAGCTTAAATTCTACGGAAGGAAAAAAAGTAGTCAAGTTGATGTAGAAGATTACCTGCCTAAGATGCTTGAGCATGATGTCTATGATAAATGTCCAGACATAGACTGCATGTGGGATTTGGGTTGGAATGATGAGACATTTGCATTTATCGAAAAATATGATGTTATAAGGGATACAGAAAAGCATATCCTTAGTGTACTTCTGGATGAGATCACCACAGATTATTGCACGATCAAGGAGGATTGA 2628 0.4014 MAKRSDFAQKLLDDLRLRKERMAATTSHSHNSNQSHHLPIDAYAYTKQTYRGSTNTRANEIVSSRNREMVNMSSRKPRSVKSWGNLSNQIIPYGKAFEHNGGKLRRADLSFTNSILGFLHQIQRGTMDRGGNLERQLASTSQTLSRVRINDISKGAHKLNHILRACFSNGVNMDTYSLNFAKELLQGAIDLEESLRMLVDLQKSSEFMITSQAQNKNRITLLEEKEEEDNEVGERRMEKMQLAHPTFSFDNKMQRPITITNSKEARKIKDSQQKRISTNTDGTADISNQTVGKGRIPNIIAKLMGLENHPDKDSGNSNIASSKHSAKGSSSTALKSKQIDNLIKNQKVAVGSFKNLMFGGPDTNLVLENQKATYYSESEVAGIKALKGFDKANIINGSACQNYVEVMMGRKQDHPHNSGTLKGRSTDGNDVGQNLNNLQERRSQVKPAIQIAKEEHTVTNKHMQMNNEKKSRDHLVVQKSILSTGGGSKMRPKNSPKQSTNNVQKKKKKSSINQPTPSKKSSDDHDLVVSNEKVKEIINRKKSSPRYQEFERANGRQTLKDHKLATSNKIKPEKIEQILSRNRQEACDRVSGQLNVLNGAEQKRFSMFVEQDLLPPTTLYNSSGGGDLQEPDKDLKYQAVQQIAINLQDQVVPEAPHEGFKTSEVAYHKSKTNGVLEDRMGLKLQDQNISIQQPLTESENCLKWNLVMSQLFVNTAEALFRLNIPFGILQGGCQDSQDQSSKLILDCGYEVMKRKGIRQELKVHTCSKISSITSTFNLIRSLDDLVRKLNEDMEKLKFYGRKKSSQVDVEDYLPKMLEHDVYDKCPDIDCMWDLGWNDETFAFIEKYDVIRDTEKHILSVLLDEITTDYCTIKED* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0211 875 MobiDBLite consensus disorder prediction 482 518 - -
Tpr3g0211 875 PANTHER OS01G0228800 PROTEIN-RELATED 1 576 - -
Tpr3g0211 875 PANTHER OS01G0228800 PROTEIN-RELATED 538 870 - -
Tpr3g0211 875 MobiDBLite consensus disorder prediction 309 335 - -
Tpr3g0211 875 MobiDBLite consensus disorder prediction 482 529 - -
Tpr3g0211 875 MobiDBLite consensus disorder prediction 311 335 - -
Tpr3g0211 875 PANTHER EXPRESSED PROTEIN 538 870 - -
Tpr3g0211 875 PANTHER EXPRESSED PROTEIN 1 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0211 Tpr-Chr3 2672670 2676833 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0211 693 872 TRM (TON1 Recruiting Motif) Superfamily AT5G42710 44.505 1.35e-36 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0211 - - mtr:MTR_8g107730 1319.29