Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0210 ATGGCACCTGTTTCATTGCCTCCTGGATTTAGGTTCCACCCTACCGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATTAATGGCCGTAGGATTGAGTTGGAGATCATCCCTGAAGTTGATCTCTACAAGTGTGAACCATGGGACTTGCCAGGGAAATCATTGCTACCAGGGAAAGATTTGGAATGGTATTTTTTCAGCCCTCGGGACAGGAAGTACCCAAATGGGTCAAGAACCAATAGAGCAACAAAATCTGGATATTGGAAGGCAACGGGGAAAGATCGAAAGGTGAATTCTCAAACTCGTGCTGTTGGAATGAAGAAAACCCTAGTTTACTATAGAGGAAGAGCACCACATGGATCTCGTACCGGTTGGGTTATGCATGAGTACCGTCTTGATGAAAGAGAATGTGACAATCCTTCTGCAGGCTTGCAGGATGCATATGCGCTTTGCCGTATATTCAAGAAGAGTACAGTGATAGTCCCAAAAGTTGGGGAGCAATATGTTAATAATGTGACTAGGCATGCAAATCATATGACAAGTGATCAACAATCATCAAGCATTGAGTTATACTCTGAAGGAGGAAGAGATGAAGTTTTAGAGAGCTCAAATTATTTGATGCCATGGGATGCAAACTCAATCCAAAACATGAATGGGAATAATAATTTCAATAACAATGGTGGAATCACAAGGGACAATGGAAATTGGACACAATTCTTATCGGAAGATTTGCTCAATCTTCCAACATCTTCCTCATCACTTCCCAATTATGGATCCACACCTAATTACCCTCCATCCAAGGTGGATATAGCACTAGAATGTGCAAGAATGCAACATAGGTTTTCCATGCCACCTTTGGAGGTGGAAGACTTTCCTCAAGTTGGTTTTAATTCCGAGATGAAAATGACACAATTAGCCTCAAGTTCAATGTGTGGAACTAGAAATGAAACAGATATCTTGCAAGAAATTCTATCTGTTGCTCAAGCTTCTCAAGAATTGATAAATAATCAATCAAACTACTCACATGCATTTGGTGGCAATGAAAACTATGCAACTCATCATGAAAATGATTTTACTTTTATGGTTGGAAATAATAATTACAATATGAATGATCATATGAACTCCATGAGATATGATGACAAAGCATGGGAAGATCCAAACATGAGATCAATAGAGATTGGAGATCTTGATGATGAATTCAAGGCTGAAAGAATGGTAGAGAATTTAAGATGGGTTGGAATGTCAAGCAATGATTTAGAGAAGAGTTTTATGGAAGAGCATCAAAAGGTTGTTCCAATTGAGGAAATTTCAAGCTTCCAAACAAACAGGAAAGAGAATGAGGTGCAAGTAGAATCTGAGCAACAAAATATCAACAAAGAAATCAATGAAACTAACATTGGTAATTTCTCAATGGAGTTTATCAATGATAATGATGACCCAAATGAGAATTTTATAGATGATAGTAACATTGATTATTCAAATTCTACAAGCTATGAAGTTGTTGAAGAAACAACAAAAGTTAGTCATGGAATGTTTGTTGCTACACGTCAAGTAGCTGATACATTTTTTCACCAAATAACTCCTTCACAAACAATCAAAGTTCAACTCAATCCAATTATGGAAAACAAAAAATCTATAGAGAATGAAGAAACATTGGTTATACCAAAAAAACAAGGGTACCCTTTCTTAAGGAAGTTTAAGGCCAATTTGATGGAGTACATGAAAAAGCCATCAAAGACAATAACTAGTGCTATTGTTTTTATGTTTGCACTTTTTTTGGTGCTTTGTGTTTATTTGAAGGAGCAAGAAAAAATTTGGTTTGTTGGTAGGAAAAGTGGTAAAGGTTTTGATGTGGTCTTGAAGAAGATAGGAATTTTCCTCACCATATCTTTGGCTCTTTGTACTATGTGGGCTAACCATATATGA 1929 0.3675 MAPVSLPPGFRFHPTDEELVSYYLKRKINGRRIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQTRAVGMKKTLVYYRGRAPHGSRTGWVMHEYRLDERECDNPSAGLQDAYALCRIFKKSTVIVPKVGEQYVNNVTRHANHMTSDQQSSSIELYSEGGRDEVLESSNYLMPWDANSIQNMNGNNNFNNNGGITRDNGNWTQFLSEDLLNLPTSSSSLPNYGSTPNYPPSKVDIALECARMQHRFSMPPLEVEDFPQVGFNSEMKMTQLASSSMCGTRNETDILQEILSVAQASQELINNQSNYSHAFGGNENYATHHENDFTFMVGNNNYNMNDHMNSMRYDDKAWEDPNMRSIEIGDLDDEFKAERMVENLRWVGMSSNDLEKSFMEEHQKVVPIEEISSFQTNRKENEVQVESEQQNINKEINETNIGNFSMEFINDNDDPNENFIDDSNIDYSNSTSYEVVEETTKVSHGMFVATRQVADTFFHQITPSQTIKVQLNPIMENKKSIENEETLVIPKKQGYPFLRKFKANLMEYMKKPSKTITSAIVFMFALFLVLCVYLKEQEKIWFVGRKSGKGFDVVLKKIGIFLTISLALCTMWANHI* 643
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0210 642 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Tpr3g0210 642 ProSiteProfiles NAC domain profile. 6 157 IPR003441 GO:0003677|GO:0006355
Tpr3g0210 642 Gene3D NAC domain 15 161 IPR036093 GO:0003677|GO:0006355
Tpr3g0210 642 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 406 - -
Tpr3g0210 642 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Tpr3g0210 642 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 1 406 - -
Tpr3g0210 642 Coils Coil 444 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0210 Tpr-Chr3 2658242 2663731 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0210 1 599 NAC Transcription Factor Family AT1G65910 47.360 5.55e-164 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Tpr3g0210 NAM 7e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0210 - - gsj:114381841 897.501