Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0203 ATGCCCTTGGAAGGGATTTTCATTGAACCAACTTCAACACCACCTGATCTTTCTCTTCATATAAGTCCACCAAGTACTTCTTCTTCTTTGATTTGCAACAATAACTCAACTCATCAACTACTTAATTATGATGCTCACAATTCATCAAGTACTAATTTCATTTCTTCAAGAACTTTGGCTCAAACTCAGGCTCAGGCTCAAGCTCACACTGAACTATCTCTTGGAAGAAATTTTAGCGGCGGTGTTGGTGGTGGAGCTCAAGAACAACCACAACCGTCACCACAACAACAACCACATAACCCTTACTTTCCTCACCTCCAACATCACCACAACTCTACAACTTCAACAACAACACCAATTAGTACAAGTCCTAATTCATCTCACATGAATCACATAAATTATGGTGTTTCATTGCTTGATATGTCATCATCATCGGAAGCTTTGAGACCAATTAAAGGGATTCCGGTGTATCACAACCGTTCATTTCCTTTTTTACCGGCCATGGAACATTCAAGAGAAAAAGATCCCAAGATGTGTTTATATCACCATATGCCTAATTCACCAACACCGTCTCCTTCTTCGTCTTCTTCTCCTCTTTCCCCCTACATCACTCCAGGAGGTTTAGATCCTATGTCGTTTTTAAACTCTAGTGGCTCTGCAGCGGCTTACAGAGCCGCTGTAGCCACAAGGTTTAATAACGAACCTTTCAAATCACATCAATATCCATTGCACCATCATCATCATCACCATCACTCACACTATGGTAGTGTTGGACTTGGAGCCTCAGAAGCATCTATGATGAGATCAAGGTTTTTGCCAAAGTTACCTACAAAGAGAAGCATGAGAGCTCCAAGAATGAGATGGACGAGTACTCTCCATGCTCGATTCGTTCACGCTGTTGAGCTCCTCGGCGGTCATGAAAGAGCAACACCAAAGTCAGTATTGGAACTAATGGATGTGAAAGATCTCACATTAGCTCATGTAAAAAGTCATTTGCAGATGTATCGAACTGTTAAGACAACTGACAAACCTGCAGCTTCTTCAGATGGATCTGGAGAAGATGATGTGCCTCAAATTGGAAGCAATGGTGGAATTCGTCAATTTTCAGACCAAAGAGGATTAACAGATAGGCCATTACAACAAGATATGGATTACTCTTCCACCACTACTTTATGGAGTAACTCTTCAAGTAGAGAACCATGGCCACCAACTAGTTCTAACGACGTAGAAGGTTTCAGACCAACTATCTTCCAATCGCAACCTATATCAGGAGGGCATCAAATTCAGGAATGTGATTCAAATCAACTGAAGAACAATTTGTCAGGATCTAATTTAGAGTGTAAGAACCCAAGCTTGGAGTTCACATTAGGCATACCAGATTGGAATGGCAAAGGACAAGCCTAA 1404 0.4131 MPLEGIFIEPTSTPPDLSLHISPPSTSSSLICNNNSTHQLLNYDAHNSSSTNFISSRTLAQTQAQAQAHTELSLGRNFSGGVGGGAQEQPQPSPQQQPHNPYFPHLQHHHNSTTSTTTPISTSPNSSHMNHINYGVSLLDMSSSSEALRPIKGIPVYHNRSFPFLPAMEHSREKDPKMCLYHHMPNSPTPSPSSSSSPLSPYITPGGLDPMSFLNSSGSAAAYRAAVATRFNNEPFKSHQYPLHHHHHHHHSHYGSVGLGASEASMMRSRFLPKLPTKRSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKPAASSDGSGEDDVPQIGSNGGIRQFSDQRGLTDRPLQQDMDYSSTTTLWSNSSSREPWPPTSSNDVEGFRPTIFQSQPISGGHQIQECDSNQLKNNLSGSNLECKNPSLEFTLGIPDWNGKGQA* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0203 467 MobiDBLite consensus disorder prediction 362 382 - -
Tpr3g0203 467 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 284 337 IPR006447 GO:0003677
Tpr3g0203 467 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 467 IPR044847 GO:0000976|GO:0006355|GO:0010158
Tpr3g0203 467 MobiDBLite consensus disorder prediction 341 382 - -
Tpr3g0203 467 PANTHER TRANSCRIPTION FACTOR MYB-HB-LIKE FAMILY-RELATED 1 467 - -
Tpr3g0203 467 SUPERFAMILY Homeodomain-like 281 337 IPR009057 -
Tpr3g0203 467 MobiDBLite consensus disorder prediction 388 407 - -
Tpr3g0203 467 Gene3D - 283 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0203 Tpr-Chr3 2535635 2542331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0203 1 464 G2-like Transcription Factor Family AT5G16560 41.223 1.41e-83 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Tpr3g0203 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0203 - - ccaj:109796302 575.089