Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0193 ATGAGACCGATTTTCGATCTTGAAGTAGAGGCCACAGAGGAATATGAATCTGATGTTGCTTCCAATACCTCTCCCAACTCTTCCATTCTCACAAATCCAACAGAGCTTAATCCCCATTCAGATCCTATCTCACTAGACTTATCACTTAATTTCAACATCAACAATGACTTGGTTGCTAGAGATTCAGCAGGAATCTCAATCTCAAGCACCAGTGAGGGTAGCAATGAACCTATCATCCCAAGAGTTTTCTCTTGCAATTACTGTCGGCGCAAATTTTATAGCTCTCAGGCACTCGGTGGACACCAAAATGCACACAAGAGAGAACGAACATTAGCGAAACGGGCTATGCGAATGGGACTATTTGCCGAGAGATATACAAGTTTAGCATCTCTCCCTCTAAATGGTAATTCTTTCAGGTCATTAGGTATAAAGACACACTCTTCATTACACCATGGTTTTTCGCCACCAACAATAAGGCCTGTTCAAGAGATAAAAAGTAATGTGAGATTCAAACAAGGATGTATCGGTCATCCGATATTATTGGAAGATGATGAGACAGAACTGTTCTGGCAAGGTAGTTTCCATCAGGTTACCGAGGGTGGAAGGGTTGGATCAACACATCGGACATTGAGCAACCACACAAGTGATTTTGACCCCAGAGAAAGTAATACTCGTCAGAGTTCAAATCTGTGTTTTACTGAGGTGAATGTGAAACCATTGGTTGATAATATAGATCTTAATTCAGCACCCGAATTAACATTGAAACTTTGA 771 0.4099 MRPIFDLEVEATEEYESDVASNTSPNSSILTNPTELNPHSDPISLDLSLNFNINNDLVARDSAGISISSTSEGSNEPIIPRVFSCNYCRRKFYSSQALGGHQNAHKRERTLAKRAMRMGLFAERYTSLASLPLNGNSFRSLGIKTHSSLHHGFSPPTIRPVQEIKSNVRFKQGCIGHPILLEDDETELFWQGSFHQVTEGGRVGSTHRTLSNHTSDFDPRESNTRQSSNLCFTEVNVKPLVDNIDLNSAPELTLKL* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0193 256 PANTHER ZINC FINGER PROTEIN 3-RELATED 7 256 - -
Tpr3g0193 256 SUPERFAMILY beta-beta-alpha zinc fingers 81 110 IPR036236 -
Tpr3g0193 256 ProSiteProfiles Zinc finger C2H2 type domain profile. 83 110 IPR013087 -
Tpr3g0193 256 ProSitePatterns Zinc finger C2H2 type domain signature. 85 105 IPR013087 -
Tpr3g0193 256 Gene3D Classic Zinc Finger 65 128 - -
Tpr3g0193 256 PANTHER ZINC FINGER PROTEIN JAGGED 7 256 IPR045320 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0193 Tpr-Chr3 2420326 2424232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0193 1 256 C2H2 Transcription Factor Family AT1G66140 40.283 1.20e-41 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr3g0193 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0193 - - mtr:MTR_3g065020 345.895