Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr3g0180 | ATGTCGCGCGAGAAGCTAGCCGGCTTATCTCTCGAGGACATCTTAGCCAATCAAAAAAGAGCCAACCCTGTACAACCGCCAAGCCAACCACCACCTCCTAAAAGCCGAACCCTCATAGACATCATCAAAGAAGACGAAACCAACAAAAAGGATCGCAGATCCTGGAAAGCCTTCAAGGATAAGCTTCGGCTCAAGCGCGCTGGCTCTGCTTGGACATCATCAATTCACATTCCAACATCAGATATTCCAATCCAAAATCCAAACAGCAGAACCTTTTCCCAATTCGGTCGTCGTGACTCAGTTCGAGTGCAAAGTCTCCAGGACTCGGACATGTCAGCTCAGGCCATGACTCACCAAGTGGAAGACCTTGATCCGTCAAATGAATCCAATGCTCCAGTTTCTAAACCACAATTCACTCGCAAGAGCTCAACCCGTTTAACAGGAGATTCCCCCGAGAGTTTGGTCGGTGGAAGAAATCTTCGAACACTCTCACGCACGAATTCCTCCAGTGTATCATCAGAGCCATTTCGAAGAGAGCGTGTGGTGACTTTTCGAGATAGCTTTGACGATGATGAGCCTGGTGATGATAGCCTGGAGACAAGCAGCAGAGGGTTATCAGCGAGGGAGGCGGTGGCGGCACAGGAGGCGGCAGAAGCTGCGGCAGAGGAGGAGGAGGCTGAAGCGGGACCTCCAACAATGTCGTTGATGGATTTGTTAGGGGAGACCGATAGAGAATTGGGGTTGGAAGGGTCGAGGTATATATTGAGTGATGAAGATGAAGATGATGATTATTATGATGATGATGAAGAAGATGAAGATGGAGAAAGTGCTTTGGAACAAACTTGTTGTATTTGTATGGTGAAGCATAAGGGTGCTGCATTGGCAGCTTGTGGTCATAGTTTCTGTAGGATGTGTTCAAGGGAGCTTATGGTTGCTAAGGGAAATTGTCCACTTTGTAATAATTTCATTTTAGAGATTCTTGACATTTTTTGA | 993 | 0.4713 | MSREKLAGLSLEDILANQKRANPVQPPSQPPPPKSRTLIDIIKEDETNKKDRRSWKAFKDKLRLKRAGSAWTSSIHIPTSDIPIQNPNSRTFSQFGRRDSVRVQSLQDSDMSAQAMTHQVEDLDPSNESNAPVSKPQFTRKSSTRLTGDSPESLVGGRNLRTLSRTNSSSVSSEPFRRERVVTFRDSFDDDEPGDDSLETSSRGLSAREAVAAQEAAEAAAEEEEAEAGPPTMSLMDLLGETDRELGLEGSRYILSDEDEDDDYYDDDEEDEDGESALEQTCCICMVKHKGAALAACGHSFCRMCSRELMVAKGNCPLCNNFILEILDIF* | 331 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr3g0180 | 330 | MobiDBLite | consensus disorder prediction | 157 | 176 | - | - | |
Tpr3g0180 | 330 | MobiDBLite | consensus disorder prediction | 1 | 52 | - | - | |
Tpr3g0180 | 330 | Coils | Coil | 207 | 227 | - | - | |
Tpr3g0180 | 330 | PANTHER | OS01G0917900 PROTEIN | 3 | 330 | - | - | |
Tpr3g0180 | 330 | MobiDBLite | consensus disorder prediction | 72 | 150 | - | - | |
Tpr3g0180 | 330 | ProSiteProfiles | Zinc finger RING-type profile. | 282 | 320 | IPR001841 | - | |
Tpr3g0180 | 330 | PANTHER | OS01G0917900 PROTEIN | 3 | 330 | - | - | |
Tpr3g0180 | 330 | SMART | ring_2 | 282 | 319 | IPR001841 | - | |
Tpr3g0180 | 330 | CDD | RING-HC | 282 | 319 | - | - | |
Tpr3g0180 | 330 | Pfam | Zinc finger, C3HC4 type (RING finger) | 279 | 323 | - | - | |
Tpr3g0180 | 330 | MobiDBLite | consensus disorder prediction | 38 | 52 | - | - | |
Tpr3g0180 | 330 | SUPERFAMILY | RING/U-box | 281 | 326 | - | - | |
Tpr3g0180 | 330 | MobiDBLite | consensus disorder prediction | 66 | 208 | - | - | |
Tpr3g0180 | 330 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 256 | 330 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr3g0180 | Tpr-Chr3 | 2274253 | 2278643 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr3g0180 | 6 | 330 | C3H Transcription Factor Family | AT3G07120 | 35.440 | 4.48e-51 | 171 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr3g0180 | - | - | gmx:100795449 | 360.918 |