Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0140 ATGAAGAGAGATCATCAAGATAGCTATGGTGGTGGAGTCACCATGAACAACAACCTTAACAACAACAAAAACAACAGCAACCTCAACAACAACAAAAGCTTTGGTGAATGTTCATCAATGCAGAACAACACCAGCAACACAAACGGAAAAGAAACCTTGTGGAGGGAAGAAAAAGACAACGGTGGTGGAATGGATGAACTATTAGCAGCATTAGGTTACAAAGTTCGTTCATCAGACATGGCTGATGTAGCTCAAAAGCTTGAACAACTTGAGATGGTTATGGGTAGTGCTCAAGAAGAAGGAATAAACCATCTTTCTTCTGATACAGTTCACTATGACCCAACCGATCTATATTCATGGGTTCAAACCATGCTCACTGAACTTAACCCTTCAACCACTGATCCACAACAAATCCCTTCTTCTTCCATCTTCAACGATGATTCTCAATATGATCTTAGCGTTATTCCTGGAATGGCAGCATACCCACCTCAAAATCATAACCAAATCCAAAACCAAACCAATGAAATTGAAGTTTCAAACAGTAACAAACGGTTGAAAACATGGGTGGAGGAATCAGAATTGCAAGATGTTTTACCGACGTTATCGCCGGCGGCGGAAACTACAAGACCGGTTGTTCTTGTTGATTCACAAGAAACCGGTGTTCGTCTTGTTCATACTTTGTTAGCTTGTGCTGAAGCGATTCAGCAAGAGAATCTGAAACTTGCTGATGCACTTGTGAAACATATCGGAGCTTTAGCATCGTCGCAAACCGGTGCGATGAGAAAAGTCGCTTCTTATTTCGCACAAGCACTTGCTAGAAGAATCTACGGAATTTACCCAGATGAAACAATCGATTCATCTTTCTCCGATGTTCTTCACATGCACTTTTATGAATCTTCACCATATCTGAAATTCGCTCATTTCACTGCAAATCAAGCTATTCTCGAAGCTTTCGCCGGTGCCGGAAGAGTCCACGTCATCGATTTTGGTCTCAAACAAGGGATGCAATGGCCGGCGCTTATGCAAGCACTTGCATTACGTCCCGGCGGTCCACCAACTTTCCGGTTAACCGGAATCGGACCGCCGCAACCCGATAACACCGACGCTTTACAACAAGTGGGTTGGAAATTGGCTCAGCTTGCTCAAACAATCGGGGTTCAGTTCGAATTTCGTGGATTCGTTTGCAACAGTTTAGCGGATCTTGACCCGAATATGCTTGAGATCCGACCCGGTGAAGCTGTTGCTGTTAACTCCGTTTTTGAACTTCACACTATGTTGGCCCGACCCGGATCCGTCGATAAAGTTCTCAACACTATTAAGAAGATTAACCCTAAAATCGTAACCATCGTTGAGCAAGAAGCGAATCACAATGGACCGGTTTTCGTAGACCGGTTCACGGAGGCTCTACATTATTACTCGAGTTTATTCGATTCTCTTGAAGGTTCTTGTTCTAATTCTAACTCGACCGGGTCCGGTTCGGTTAATCAGGATTTATTAATGTCGGAGCTTTATCTGGGGAGACAGATATGTAACGTGGTGGCTTATGAAGGAGTGGACCGGGTTGAAAGACATGAGACACTGAACCAGTGGCGATCGAGAATGGGTTCGGCCGGTTTTGATCCGGTTCATTTGGGTTCAAATGCGTTTAAACAAGCGAGTACTTTATTGGCTTTATTCGCCGGCGGTGATGGGTATAGGGTGGAGGAAAATAATGGGTGTCTTATGCTTGGGTGGCACACGAGGTCACTCATTGCTACTTCTGCGTGGAAGCTTCCACTCAGTGAGTCCAAGTGA 1794 0.4443 MKRDHQDSYGGGVTMNNNLNNNKNNSNLNNNKSFGECSSMQNNTSNTNGKETLWREEKDNGGGMDELLAALGYKVRSSDMADVAQKLEQLEMVMGSAQEEGINHLSSDTVHYDPTDLYSWVQTMLTELNPSTTDPQQIPSSSIFNDDSQYDLSVIPGMAAYPPQNHNQIQNQTNEIEVSNSNKRLKTWVEESELQDVLPTLSPAAETTRPVVLVDSQETGVRLVHTLLACAEAIQQENLKLADALVKHIGALASSQTGAMRKVASYFAQALARRIYGIYPDETIDSSFSDVLHMHFYESSPYLKFAHFTANQAILEAFAGAGRVHVIDFGLKQGMQWPALMQALALRPGGPPTFRLTGIGPPQPDNTDALQQVGWKLAQLAQTIGVQFEFRGFVCNSLADLDPNMLEIRPGEAVAVNSVFELHTMLARPGSVDKVLNTIKKINPKIVTIVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSCSNSNSTGSGSVNQDLLMSELYLGRQICNVVAYEGVDRVERHETLNQWRSRMGSAGFDPVHLGSNAFKQASTLLALFAGGDGYRVEENNGCLMLGWHTRSLIATSAWKLPLSESK* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0140 597 MobiDBLite consensus disorder prediction 1 24 - -
Tpr3g0140 597 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 59 590 IPR005202 -
Tpr3g0140 597 ProSiteProfiles GRAS family profile. 214 590 IPR005202 -
Tpr3g0140 597 Pfam Transcriptional regulator DELLA protein N terminal 65 131 IPR021914 -
Tpr3g0140 597 Coils Coil 80 100 - -
Tpr3g0140 597 Pfam GRAS domain family 223 590 IPR005202 -
Tpr3g0140 597 Gene3D - 63 128 IPR038088 -
Tpr3g0140 597 MobiDBLite consensus disorder prediction 10 24 - -
Tpr3g0140 597 PANTHER DELLA PROTEIN RGL1 59 590 IPR030006 GO:0003712|GO:0005634
Tpr3g0140 597 SMART DELLA_2 65 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0140 Tpr-Chr3 1682127 1684650 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0140 50 591 GRAS Transcription Factor Family AT1G14920 63.587 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr3g0140 GRAS 5.8e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0140 K14494 - gmx:100799695 892.108