Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0136 ATGGAGAACTTGTTAGGAGGGCTCAAAATTCATGTTCAAAGAGGTGTTAAACTTGCTGTCAGGGATGTAGTCAGTAGTACTAGTGATCCTTATGTTGTCATCAAAATGGGAAAACAGAAGGTGAAAACTAAGCCAATGAAGAAGAATCTGAATCCTGAGTGGAATGAAGACTTGACTTTATCCATTTCAGATCTTGATACTCCAATCCATCTACAAGTGTACGACAAGGACAGCTTTACCGTGGACGACAAAATGGGGGATGCCAAAATCGACATCGGTCCATTTGTCGAAGCTGTAAAGATGCGGTTGGAAGGTCTACCGAATGATACTATAGTTATAAGGGTGCATCCTAACAGACAGAGTTGCTTAGCAGAAGAGAGTAAAATTGTTTATAAAGATGGTAAAGTTGTCCAAAATATGGTTGTTAGACTAAGGAATGTTGAATGTGGTGAAGTGGAGCTTCAAAGGGTCTTTAGGTTAGAAAATATTTGA 492 0.3923 MENLLGGLKIHVQRGVKLAVRDVVSSTSDPYVVIKMGKQKVKTKPMKKNLNPEWNEDLTLSISDLDTPIHLQVYDKDSFTVDDKMGDAKIDIGPFVEAVKMRLEGLPNDTIVIRVHPNRQSCLAEESKIVYKDGKVVQNMVVRLRNVECGEVELQRVFRLENI* 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0136 163 Gene3D C2 domain 5 155 IPR035892 -
Tpr3g0136 163 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 155 IPR044562 -
Tpr3g0136 163 Pfam C2 domain 8 94 IPR000008 -
Tpr3g0136 163 SMART C2_3c 7 104 IPR000008 -
Tpr3g0136 163 ProSiteProfiles C2 domain profile. 1 105 IPR000008 -
Tpr3g0136 163 PRINTS C2 domain signature 24 36 IPR000008 -
Tpr3g0136 163 PRINTS C2 domain signature 48 61 IPR000008 -
Tpr3g0136 163 PRINTS C2 domain signature 69 77 IPR000008 -
Tpr3g0136 163 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 155 - -
Tpr3g0136 163 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 102 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0136 Tpr-Chr3 1643168 1645634 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0136 40 154 C2H2 Transcription Factor Family AT1G70790 56.410 7.23e-44 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0136 - - pvu:PHAVU_001G230800g 238.424