Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0135 ATGGAGAACGCGTTAGGTCTGCTCAAAATTCATGTTCAAAGAGGAGTCAATCTTGCTGTTAGAGATGTAGTTAGCAGTGATCCTTATGTTGTCATCAAAATGGGGAAACAGAAGCTGAAGACTAAGGTAGTGAAGAAGAATCTGAATCCTGAGTGGAATGATGACTTGACTTTATCCATTTCAGATCCTCATACTCCCATTCATCTACATGTGTACGATAAGGACCTATTTAGCATGGACGACAAAATGGGGGACGCTGAGTTCGACATTGGTCCATTTTTTGAAGCGGTAAAGATGCGTTTGGAAGGTCTCCCAAATGGTACTATAGTTACAAGGGTACAACCTAGCAGAAAAAATTGCTTAGCAGAAGAGAGTCACATTGTTTGTGAAGATGGCAAGGTTTCACAAAACATGGTTCTTAGACTAAGAAATGTCGAATGTGGCGAAGTGGAGCTTCAATTGCTTTGGACTGACATTCCTGGTTCAACGGGTTTGTAG 498 0.4137 MENALGLLKIHVQRGVNLAVRDVVSSDPYVVIKMGKQKLKTKVVKKNLNPEWNDDLTLSISDPHTPIHLHVYDKDLFSMDDKMGDAEFDIGPFFEAVKMRLEGLPNGTIVTRVQPSRKNCLAEESHIVCEDGKVSQNMVLRLRNVECGEVELQLLWTDIPGSTGL* 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0135 165 CDD C2_ArfGAP 5 148 - -
Tpr3g0135 165 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Tpr3g0135 165 Pfam C2 domain 7 92 IPR000008 -
Tpr3g0135 165 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 100 IPR035892 -
Tpr3g0135 165 Gene3D C2 domain 1 116 IPR035892 -
Tpr3g0135 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 1-LIKE 1 163 - -
Tpr3g0135 165 SMART C2_3c 7 102 IPR000008 -
Tpr3g0135 165 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 163 IPR044562 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0135 Tpr-Chr3 1616214 1619152 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0135 38 165 C2H2 Transcription Factor Family AT1G70790 60.769 7.76e-52 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0135 - - gmx:100793531 273.092