Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0131 ATGAACGTTCGCTCAGCGAAGGTTAGCGAGAGTGAGCGAACAGAGGCAGAGAGTTATGGTCTGATGGCGAGAGATGGCGAGCTTCAGCGAACAAATGATGAGTCAGATTTGAATGGTATAGACATATATTGTTTAAAATCAAAGAGTAAAGATAATCACTTATTAAACTTCAAGATAAATATTGTACACCCCTTTAAAGATAGTGTTCCGGTTGCTCCTGCTGATTTAGAAGCCGTTTTAATTTTGCATCCTGAAATAGTTGATGCTGCTGTTACAGCTGCCAAAGATGAAGAAACTGAGGAGATTCCAGTGGCGTTTGTGGTCAGGAAGGTTGGAAGTGTACTTTCTCCATAG 354 0.4096 MNVRSAKVSESERTEAESYGLMARDGELQRTNDESDLNGIDIYCLKSKSKDNHLLNFKINIVHPFKDSVPVAPADLEAVLILHPEIVDAAVTAAKDEETEEIPVAFVVRKVGSVLSP* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0131 117 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 70 116 - -
Tpr3g0131 117 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 70 116 - -
Tpr3g0131 117 Pfam AMP-binding enzyme C-terminal domain 76 111 IPR025110 -
Tpr3g0131 117 SUPERFAMILY Acetyl-CoA synthetase-like 71 116 - -
Tpr3g0131 117 Gene3D - 68 116 IPR045851 -
Tpr3g0131 117 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0131 Tpr-Chr3 1594076 1596703 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0131 71 116 Monolignol Biosynthesis Gene Families AT4G19010 69.565 5.16e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0131 K01904 - gmx:100804808 82.0333