Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr3g0109 ATGCTTCAAACTTCTACAACTTTCAAGTGCTTTACCTTAAAGGATATACAAACTGCGACAAGGAACGCGATTCCAGATAAGCAGGAAGATGACTTTTGTTGTGTAAAGGGATGGATCAATAGGCATACATTAGCACCCACTAAAAAAGATTCTGGTTTAGAAATTTCTGTGAAGAAGCTTAACCGTGTGAACCACCAGAAACGCAGTGTATGGTTGAGAAAAATCAACAACATGGGCCAGCTGAGTCATCCTAATCTTGTGAAATTGATTGGTTATTGCTTGGAGGATCAATACCCCATTTTGGCATATGAATTTTTGGTCAATGGAAGTTTGGACAATCATTTGTTTAATAGGTCTTCTAACATGAAGCCACTCTCTTGGACAGTCAGAATGAAGATAGCTCTTGATATTGCCAAGGGTCTGGCATTTCTTCACAGTAATGAAGTCGAAGTGATACATGGAGATATCAAAACTTCTAATATCTTGATTGATTCTAACTATAACGCAAAACTATCCGATTTTGGGTTGGAAAAAATTAGAGATAAATTTGGTGAGGTGAACTCGAGTTTGACGTTATATATAGCGATGTCTCAACCCTACAGATACATAGCACCTGAGTATTATATCACAGTTCGCCAAACCAAAAGGAGTGATATATACAGTTTTGGAGTTGTTCTGCTGGAAATTTTGTCTGGCAAATGTGCAGATGCTAAAAACTGGCCACGATGCGAACTAGGGGACAAGCCTGAGCGGTTCCACATCAACCAATACATGATCTTCCAACTTATGGATTCCTATTTAGAAGGCCAGTATTCGTTGCATGAAGCGGGTGTAGTTGCTATCATTGCAATTCGCTGTCTGTCTCGTGATCCAAAATATAGACCAAAGATGGATGAAGTGGTGAGTTTATTGGAACAAAATATAGGATTCTAA 933 0.388 MLQTSTTFKCFTLKDIQTATRNAIPDKQEDDFCCVKGWINRHTLAPTKKDSGLEISVKKLNRVNHQKRSVWLRKINNMGQLSHPNLVKLIGYCLEDQYPILAYEFLVNGSLDNHLFNRSSNMKPLSWTVRMKIALDIAKGLAFLHSNEVEVIHGDIKTSNILIDSNYNAKLSDFGLEKIRDKFGEVNSSLTLYIAMSQPYRYIAPEYYITVRQTKRSDIYSFGVVLLEILSGKCADAKNWPRCELGDKPERFHINQYMIFQLMDSYLEGQYSLHEAGVVAIIAIRCLSRDPKYRPKMDEVVSLLEQNIGF* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr3g0109 310 PANTHER OS01G0588500 PROTEIN-RELATED 8 306 - -
Tpr3g0109 310 ProSiteProfiles Protein kinase domain profile. 1 308 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0109 310 Gene3D Transferase(Phosphotransferase) domain 1 107 308 - -
Tpr3g0109 310 SUPERFAMILY Protein kinase-like (PK-like) 49 305 IPR011009 -
Tpr3g0109 310 PANTHER APK1B, PUTATIVE-RELATED 8 306 - -
Tpr3g0109 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 151 163 IPR008271 GO:0004672|GO:0006468
Tpr3g0109 310 Gene3D Phosphorylase Kinase; domain 1 1 105 - -
Tpr3g0109 310 SMART serkin_6 38 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr3g0109 310 PIRSF ILK 28 308 - -
Tpr3g0109 310 Pfam Protein tyrosine and serine/threonine kinase 40 304 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr3g0109 Tpr-Chr3 1385361 1387645 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr3g0109 4 304 Receptor kinase-like Gene Family AT3G58690 36.137 4.50e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr3g0109 PK_Tyr_Ser-Thr 1.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr3g0109 - - mtr:MTR_3g067765 330.487